RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 XPO7Q9UIA9 1087 aaKnown RBP10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 VANGL2Q9ULK5 521 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 PCDHGA3Q9Y5H0 932 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 MAP2P11137 1827 aaKnown RBP10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 FOXN1O15353 648 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 PRKACAP17612 351 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 CBX5P45973 191 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 AP2B1P63010 937 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 ARHGAP4P98171 946 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 LAPTM5Q13571 262 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 PTK2BQ14289 1009 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 KRT81Q14533 505 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 ZNF827Q17R98 1081 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 CCDC58Q4VC31 144 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 NOSTRINQ8IVI9 506 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 ACTRT2Q8TDY3 377 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 SCFD2Q8WU76 684 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 PLEKHA8Q96JA3 519 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 NOX5Q96PH1 765 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 TTYH3Q9C0H2 523 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 TMEM60Q9H2L4 133 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 EHMT1Q9H9B1 1298 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 SCPEP1Q9HB40 452 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 CD209Q9NNX6 404 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 PCDHA13Q9Y5I0 950 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 CEP170BQ9Y4F5 1589 aaPredicted RBP10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 C15orf38-AP3S2A0A0A6YYH1 394 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 GOLGA8QA0A0J9YX86 632 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 GOLGA8OA6NCC3 632 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 GOLGA8NF8WBI6 632 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 GOLGA8RI6L899 631 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 GSC2O15499 205 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 CLOCKO15516 846 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 BUD23O43709 281 aaKnown RBP10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 SCO2O43819 266 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 PHF2O75151 1096 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 VCLP18206 1134 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 WEE1P30291 646 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 KPNA1P52294 538 aaPredicted RBP10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 RAP1GDS1P52306 607 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 KCNMA1Q12791 1236 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 STK11Q15831 433 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 C4orf46Q504U0 113 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 TCP11X2Q5H9J9 407 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 ZCCHC8Q6NZY4 707 aaKnown RBP10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 ARPINQ7Z6K5 226 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 REM2Q8IYK8 340 aaPredicted RBP10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 MARVELD2Q8N4S9 558 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 MB21D1Q8N884 522 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 TERB1Q8NA31 727 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 DTX3LQ8TDB6 740 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 ZC3H15Q8WU90 426 aaKnown RBP10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 CFAP57Q96MR6 1250 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 KLC2Q9H0B6 622 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 EPB41L4BQ9H329 900 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 SLITRK6Q9H5Y7 841 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 ARMC7Q9H6L4 198 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 AZI2Q9H6S1 392 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 MLXIPQ9HAP2 919 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 IGSF9Q9P2J2 1179 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 RBMX2Q9Y388 322 aaKnown RBP10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 TAF6LQ9Y6J9 622 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 WASF2Q9Y6W5 498 aa10.94□□□□□ -0.66
PRPF4B-206ENST00000481109 NCAPD2Q15021 1401 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 CCDC188H7C350 402 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 HAUS5O94927 633 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 CD48P09326 243 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 HNRNPH3P31942 346 aaKnown RBP10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 CSTF2P33240 577 aaKnown RBP eCLIP10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 IFI35P80217 286 aaPredicted RBP10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 PRKCEQ02156 737 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 STK4Q13043 487 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 FLIIQ13045 1269 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 APOFQ13790 326 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 GNA13Q14344 377 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 GRIK5Q16478 980 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 SLC45A4Q5BKX6 768 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 FAM122CQ6P4D5 195 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 IDO2Q6ZQW0 420 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 RASSF3Q86WH2 238 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 IFNLR1Q8IU57 520 aaPredicted RBP10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 AHI1Q8N157 1196 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 ANKRD53Q8N9V6 530 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 FLAD1Q8NFF5 587 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 TTC9Q92623 222 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 VPS33BQ9H267 617 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 VPS16Q9H269 839 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 LRRC4CQ9HCJ2 640 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 IP6K2Q9UHH9 426 aa10.93□□□□□ -0.66
PRPF4B-206ENST00000481109 A0A1W2PQJ5 194 aa10.92□□□□□ -0.66
PRPF4B-206ENST00000481109 OR5K4A6NMS3 321 aa10.92□□□□□ -0.66
PRPF4B-206ENST00000481109 LGALS16A8MUM7 142 aa10.92□□□□□ -0.66
PRPF4B-206ENST00000481109 WASLO00401 505 aaPredicted RBP10.92□□□□□ -0.66
PRPF4B-206ENST00000481109 ZNF263O14978 683 aa10.92□□□□□ -0.66
PRPF4B-206ENST00000481109 MAGEB2O15479 319 aa10.92□□□□□ -0.66
PRPF4B-206ENST00000481109 ITM2AO43736 263 aa10.92□□□□□ -0.66
PRPF4B-206ENST00000481109 ARHGEF15O94989 841 aa10.92□□□□□ -0.66
PRPF4B-206ENST00000481109 POLD2P49005 469 aa10.92□□□□□ -0.66
PRPF4B-206ENST00000481109 CLK3P49761 638 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms