RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 KCNK12Q9HB15 430 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 LY9Q9HBG7 655 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 SUPT16HQ9Y5B9 1047 aaKnown RBP7.39□□□□□ -1.23
LRCH3-216ENST00000481048 MUC6Q6W4X9 2439 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 COL4A6Q14031 1691 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 PIEZO1Q92508 2521 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 CCDC69A6NI79 296 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 RRN3P2A6NIE6 340 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 NCK2O43639 380 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 CST3P01034 146 aaPredicted RBP7.38□□□□□ -1.23
LRCH3-216ENST00000481048 RB1P06400 928 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 TMEM253P0C7T8 217 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 RAC2P15153 192 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 KCNQ1P51787 676 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 ANTXR2P58335 489 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 TCTN1Q2MV58 587 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 LEXMQ3ZCV2 418 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 KRT40Q6A162 431 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.38□□□□□ -1.23
LRCH3-216ENST00000481048 CDH24Q86UP0 819 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 MYOCDQ8IZQ8 938 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 ABHD4Q8TB40 342 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 GDPD5Q8WTR4 605 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 MRPL38Q96DV4 380 aaKnown RBP7.38□□□□□ -1.23
LRCH3-216ENST00000481048 SMARCAD1Q9H4L7 1026 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 EHMT1Q9H9B1 1298 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 SETD4Q9NVD3 440 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 ERAP1Q9NZ08 941 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 RTEL1Q9NZ71 1219 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 RWDD3Q9Y3V2 267 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 RBM8AQ9Y5S9 174 aaKnown RBP7.38□□□□□ -1.23
LRCH3-216ENST00000481048 SQORQ9Y6N5 450 aa7.38□□□□□ -1.23
LRCH3-216ENST00000481048 REV3LO60673 3130 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 XIRP2A4UGR9 3374 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 MBLAC1A4D2B0 266 aaPredicted RBP7.37□□□□□ -1.23
LRCH3-216ENST00000481048 NPIPB6E9PJ23 425 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 H3BNC9 293 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 PRC1O43663 620 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 BRD1O95696 1058 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 FOSP01100 380 aaPredicted RBP7.37□□□□□ -1.23
LRCH3-216ENST00000481048 TCF7P36402 384 aaPredicted RBP7.37□□□□□ -1.23
LRCH3-216ENST00000481048 TNK2Q07912 1038 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 EPC2Q52LR7 807 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 TIGD5Q53EQ6 642 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 LILRA6Q6PI73 481 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 USP17L6PQ6QN14 398 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 TMCO2Q7Z6W1 182 aaPredicted RBP7.37□□□□□ -1.23
LRCH3-216ENST00000481048 SGMS1Q86VZ5 419 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 SRBD1Q8N5C6 995 aaKnown RBP7.37□□□□□ -1.23
LRCH3-216ENST00000481048 FANCBQ8NB91 859 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 COX4I2Q96KJ9 171 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 YTHDC1Q96MU7 727 aaKnown RBP7.37□□□□□ -1.23
LRCH3-216ENST00000481048 YME1L1Q96TA2 773 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 IFIH1Q9BYX4 1025 aaKnown RBP7.37□□□□□ -1.23
LRCH3-216ENST00000481048 GLT8D2Q9H1C3 349 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 EPB41L4BQ9H329 900 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 BCAS3Q9H6U6 928 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 UBE2ZQ9H832 354 aaPredicted RBP7.37□□□□□ -1.23
LRCH3-216ENST00000481048 FAM50BQ9Y247 325 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 UBIAD1Q9Y5Z9 338 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 SLC12A7Q9Y666 1083 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 MYO10Q9HD67 2058 aa7.37□□□□□ -1.23
LRCH3-216ENST00000481048 NFASCO94856 1347 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.36□□□□□ -1.23
LRCH3-216ENST00000481048 C5orf67F2Z3F1 127 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 PI4K2BG5E9Z4 385 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 hCG_1984214I3L0E3 225 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 SH2B2O14492 632 aaPredicted RBP7.36□□□□□ -1.23
LRCH3-216ENST00000481048 SORBS3O60504 671 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 CHRNA1P02708 482 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 KCNA2P16389 499 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 KIR3DL1P43629 444 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 SLC26A2P50443 739 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 MTMR1Q13613 665 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 NECTIN1Q15223 517 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 NAALADL2Q58DX5 795 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 RALGPS1Q5JS13 557 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 UTP14CQ5TAP6 766 aaKnown RBP7.36□□□□□ -1.23
LRCH3-216ENST00000481048 SYNE3Q6ZMZ3 975 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 PLPPR4Q7Z2D5 763 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 FAM178BQ8IXR5 827 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 TMEM192Q8IY95 271 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 NME8Q8N427 588 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 FIBCD1Q8N539 461 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 ZNF713Q8N859 430 aaPredicted RBP7.36□□□□□ -1.23
LRCH3-216ENST00000481048 LMBR1Q8WVP7 490 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 PIBF1Q8WXW3 757 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 IL17RAQ96F46 866 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 ASB16Q96NS5 453 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 C17orf80Q9BSJ5 609 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 FTHL17Q9BXU8 183 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 LSG1Q9H089 658 aaKnown RBP7.36□□□□□ -1.23
LRCH3-216ENST00000481048 LMAN2LQ9H0V9 348 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 JADE2Q9NQC1 790 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 RBM28Q9NW13 759 aaKnown RBP7.36□□□□□ -1.23
LRCH3-216ENST00000481048 MTUS1Q9ULD2 1270 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 PCDHA6Q9UN73 950 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 PCDHA8Q9Y5H6 950 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 TAF6LQ9Y6J9 622 aa7.36□□□□□ -1.23
LRCH3-216ENST00000481048 ATG2AQ2TAZ0 1938 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms