RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 LINC00523Q86TU6 105 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 PRG3Q9Y2Y8 225 aaPredicted RBP10.02□□□□□ -0.81
VEGFA-212ENST00000480614 PALLDQ8WX93 1383 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 VIRMAQ69YN4 1812 aaKnown RBP10.02□□□□□ -0.81
VEGFA-212ENST00000480614 PGM1P36871 562 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 OSBPL1AQ9BXW6 950 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 H2AFY2Q9P0M6 372 aaPredicted RBP10.02□□□□□ -0.81
VEGFA-212ENST00000480614 EIF2S1P05198 315 aaKnown RBP10.02□□□□□ -0.81
VEGFA-212ENST00000480614 P4HBP07237 508 aaKnown RBP10.02□□□□□ -0.81
VEGFA-212ENST00000480614 CRKP46108 304 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 ST8SIA6P61647 398 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 LUZP2Q86TE4 346 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 C18orf8Q96DM3 657 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 TTC7AQ9ULT0 858 aaPredicted RBP10.02□□□□□ -0.81
VEGFA-212ENST00000480614 ZC3H4Q9UPT8 1303 aaKnown RBP10.02□□□□□ -0.81
VEGFA-212ENST00000480614 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.02□□□□□ -0.815e-6■□□□□ 9.5
VEGFA-212ENST00000480614 AFDNP55196 1824 aaKnown RBP10.02□□□□□ -0.81
VEGFA-212ENST00000480614 PRCPP42785 496 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 STKLD1Q8NE28 680 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 INTS2Q9H0H0 1204 aaKnown RBP10.02□□□□□ -0.81
VEGFA-212ENST00000480614 STMN3Q9NZ72 180 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 PCDHA10Q9Y5I2 948 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 ERVK-7P63135 1459 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 AGTP01019 485 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PDIA5Q14554 519 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 TRAPPC11Q7Z392 1133 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 KCTD17Q8N5Z5 321 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PUS7LQ9H0K6 701 aaKnown RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 SMARCAD1Q9H4L7 1026 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 UTP6Q9NYH9 597 aaKnown RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 CAB39Q9Y376 341 aaPredicted RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PTK6Q13882 451 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 CEP78Q5JTW2 689 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 SPATA2LQ8IUW3 424 aaPredicted RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 UNC45AQ9H3U1 944 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 NCALDP61601 193 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 SPDYAQ5MJ70 313 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 GAS2L3Q86XJ1 694 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 FAM162AQ96A26 154 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 VPS50Q96JG6 964 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 KATNAL1Q9BW62 490 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 RIC8BQ9NVN3 520 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 SCN3BQ9NY72 215 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PSMC3IPQ9P2W1 217 aaPredicted RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PITPNM2Q9BZ72 1349 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 ADORA2BP29275 332 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 EIF3EP60228 445 aaKnown RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PRPF18Q99633 342 aaKnown RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 FAM217BQ9NTX9 383 aaPredicted RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 RGL1Q9NZL6 768 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 GLI2P10070 1586 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 POTECB2RU33 542 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 M0R3G1 203 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 FOXD4Q12950 439 aaPredicted RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 NME3Q13232 169 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 C19orf60Q96EN9 201 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 ASCC3Q8N3C0 2202 aaKnown RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 UBA6A0AVT1 1052 aaPredicted RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 TRPC5OSA6NMA1 111 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 SLC16A4O15374 487 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 ARHGEF7Q14155 803 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 KRT78Q8N1N4 520 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 RNF25Q96BH1 459 aaPredicted RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 THAP11Q96EK4 314 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PCSK1NQ9UHG2 260 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 OVOS2A0A0G2JMS6 1433 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 OVOS2A0A0J9YW53 1432 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 OVOS2Q6IE36 1432 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 SUPT3HB4E1H0 165 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PLEKHA8P1O95397 391 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PCSK1P29120 753 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 MAPRE1Q15691 268 aaKnown RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 DCAF4L1Q3SXM0 396 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 HORMAD1Q86X24 394 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 A8MXQ7 604 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 CD4P01730 458 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 RBP5P82980 135 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 FAM47EQ6ZV65 393 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 MROH7-TTC4A0A0A0MT08 1334 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 IQCA1LA6NCM1 817 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PHF2O75151 1096 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 NPEPPSP55786 919 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PROSER3Q2NL68 480 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 RIBC1Q8N443 379 aaPredicted RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 LPAR1Q92633 364 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 HEMGNQ9BXL5 484 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 TLR7Q9NYK1 1049 aaKnown RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PDAP1Q13442 181 aaKnown RBP10.01□□□□□ -0.81
VEGFA-212ENST00000480614 PPP1R16BQ96T49 567 aa10.01□□□□□ -0.81
VEGFA-212ENST00000480614 CDHR2Q9BYE9 1310 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 TMEM47Q9BQJ4 181 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 AFF4Q9UHB7 1163 aaKnown RBP10□□□□□ -0.81
VEGFA-212ENST00000480614 PDS5AQ29RF7 1337 aaKnown RBP10□□□□□ -0.81
VEGFA-212ENST00000480614 EVPLLA8MZ36 301 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 GRIK1P39086 918 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 OSBPL10Q9BXB5 764 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 GABBR1Q9UBS5 961 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 GUCY1A3Q02108 690 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 ZNF467Q7Z7K2 595 aaPredicted RBP10□□□□□ -0.81
VEGFA-212ENST00000480614 SNX31Q8N9S9 440 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms