RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 TRPV2Q9Y5S1 764 aa5.46□□□□□ -1.54
PTCD3-213ENST00000480102 A0A0U1RQF3 1178 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 GSC2O15499 205 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 TIAF1O95411 115 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 CYP11A1P05108 521 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 STAG3L1P0CL83 205 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 DARSP14868 501 aaKnown RBP5.45□□□□□ -1.54
PTCD3-213ENST00000480102 AXLP30530 894 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 TOB1P50616 345 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-213ENST00000480102 RAB27AP51159 221 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 CCL23P55773 120 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 ERVK-21P61565 698 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 ZNF200P98182 395 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-213ENST00000480102 ATP2C1P98194 919 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-213ENST00000480102 PLCB3Q01970 1234 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 POU4F3Q15319 338 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 TMEM266Q2M3C6 531 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 RPS26P11Q5JNZ5 115 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-213ENST00000480102 EXOSC6Q5RKV6 272 aaKnown RBP5.45□□□□□ -1.54
PTCD3-213ENST00000480102 UTP14CQ5TAP6 766 aaKnown RBP5.45□□□□□ -1.54
PTCD3-213ENST00000480102 LARP1BQ659C4 914 aaKnown RBP5.45□□□□□ -1.54
PTCD3-213ENST00000480102 RUFY4Q6ZNE9 571 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 SLC24A5Q71RS6 500 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 SRGAP1Q7Z6B7 1085 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 FAM20CQ8IXL6 584 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 DEFB123Q8N688 67 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 P2RX5Q93086 422 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 ZNF689Q96CS4 500 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-213ENST00000480102 SCLYQ96I15 445 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 TRIM56Q9BRZ2 755 aaKnown RBP5.45□□□□□ -1.54
PTCD3-213ENST00000480102 LXNQ9BS40 222 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 NTPCRQ9BSD7 190 aaKnown RBP5.45□□□□□ -1.54
PTCD3-213ENST00000480102 NT5C3AQ9H0P0 336 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 LMAN2LQ9H0V9 348 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 TTC12Q9H892 705 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-213ENST00000480102 SLC28A3Q9HAS3 691 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 DACT1Q9NYF0 836 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 PADI3Q9ULW8 664 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 SMC3Q9UQE7 1217 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 TELO2Q9Y4R8 837 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 SAMM50Q9Y512 469 aa5.45□□□□□ -1.54
PTCD3-213ENST00000480102 LTBP2Q14767 1821 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 CHD9Q3L8U1 2897 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 SCO2A0A1W2PP80 73 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 C9IYK1 514 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 ENPP3O14638 875 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 NCK2O43639 380 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 RPS6KA5O75582 802 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 DGKIO75912 1065 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 IGLV1-40P01703 118 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 CTSBP07858 339 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 ACRP10323 421 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 SFPQP23246 707 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 GUCY2CP25092 1073 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 MAOBP27338 520 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 MARK3P27448 753 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 GJB2P29033 226 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 ARL2P36404 184 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 LONP1P36776 959 aaKnown RBP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 MAPK8P45983 427 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 RARRES1P49788 294 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 GPC3P51654 580 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 POU5F1Q01860 360 aaKnown RBP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 SP4Q02446 784 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 UBE3AQ05086 875 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 FAM187BQ17R55 369 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 TTC38Q5R3I4 469 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 EFCAB12Q6NXP0 572 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 DTHD1Q6ZMT9 781 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 OTOP2Q7RTS6 562 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 CATSPER3Q86XQ3 398 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 CKAP2LQ8IYA6 745 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 CMTR2Q8IYT2 770 aaKnown RBP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 C12orf50Q8NA57 414 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 CNNM3Q8NE01 707 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 DNAJB3Q8WWF6 145 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 PSPC1Q8WXF1 523 aaKnown RBP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 PSMG3-AS1Q96PY0 264 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 TGS1Q96RS0 853 aaKnown RBP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 EIF2AK1Q9BQI3 630 aaKnown RBP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 BCO2Q9BYV7 579 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 GCOM2Q9BZD3 368 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 FTOQ9C0B1 505 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 TTYH1Q9H313 450 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 C7orf69Q9H7B7 122 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 ERVK-5Q9HDB9 667 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 UBN1Q9NPG3 1134 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 RGS18Q9NS28 235 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 GJB4Q9NTQ9 266 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 TMEM161AQ9NX61 479 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 RNF112Q9ULX5 631 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 CDY2AQ9Y6F7 541 aa5.44□□□□□ -1.54
PTCD3-213ENST00000480102 ZNFX1Q9P2E3 1918 aaKnown RBP5.44□□□□□ -1.54
PTCD3-213ENST00000480102 HMX2A2RU54 273 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 LINC01553A4QN01 128 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 H3BQV1 296 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 MARCH6O60337 910 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 LINC00271P0C7V0 271 aa5.43□□□□□ -1.54
PTCD3-213ENST00000480102 CYP11B2P19099 503 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms