RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 MOCS1Q9NZB8 636 aa7.03□□□□□ -1.28
COMMD3-212ENST00000479958 CLTCL1P53675 1640 aa7.03□□□□□ -1.28
COMMD3-212ENST00000479958 WASHC2CQ9Y4E1 1318 aa7.03□□□□□ -1.28
COMMD3-212ENST00000479958 ZMYM4Q5VZL5 1548 aa7.02□□□□□ -1.28
COMMD3-212ENST00000479958 AHRRA9YTQ3 701 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 ENDOD1O94919 500 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 MXRA7P84157 204 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 SP140Q13342 867 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 NOMO1Q15155 1222 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 RRP12Q5JTH9 1297 aaKnown RBP7.02□□□□□ -1.29
COMMD3-212ENST00000479958 ATXN7L2Q5T6C5 722 aaPredicted RBP7.02□□□□□ -1.29
COMMD3-212ENST00000479958 ZNF627Q7L945 461 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 ZNF572Q7Z3I7 529 aaPredicted RBP7.02□□□□□ -1.29
COMMD3-212ENST00000479958 PQLC1Q8N2U9 271 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 MYEOVQ96EZ4 313 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 CEP95Q96GE4 821 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 TTPALQ9BTX7 342 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 MENTQ9BUN1 341 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 PUS7LQ9H0K6 701 aaKnown RBP7.02□□□□□ -1.29
COMMD3-212ENST00000479958 IKZF4Q9H2S9 585 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 SPATA31E1Q6ZUB1 1445 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 ABCC3O15438 1527 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 EFCAB6Q5THR3 1501 aa7.02□□□□□ -1.29
COMMD3-212ENST00000479958 LEFTY2O00292 366 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 RNASE9P60153 205 aaKnown RBP7.01□□□□□ -1.29
COMMD3-212ENST00000479958 MBNL2Q5VZF2 373 aaKnown RBP7.01□□□□□ -1.29
COMMD3-212ENST00000479958 LRRC55Q6ZSA7 311 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 Q6ZVL8 140 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 RHOUQ7L0Q8 258 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 PLXDC1Q8IUK5 500 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 CYFIP2Q96F07 1278 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 SENP6Q9GZR1 1112 aaPredicted RBP7.01□□□□□ -1.29
COMMD3-212ENST00000479958 REXO4Q9GZR2 422 aaKnown RBP7.01□□□□□ -1.29
COMMD3-212ENST00000479958 AKIP1Q9NQ31 210 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 SLC5A4Q9NY91 659 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 SCOCQ9UIL1 159 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 UHRF1BP1Q6BDS2 1440 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 SPHKAPQ2M3C7 1700 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 BCORL1Q5H9F3 1711 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 TRPM2O94759 1503 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 LMTK2Q8IWU2 1503 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 K7ESF4 209 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 FOXN1O15353 648 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 RHOBTB3O94955 611 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 NR4A1P22736 598 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 MCAMP43121 646 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 TAP1Q03518 808 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 KLF1Q13351 362 aaPredicted RBP7.01□□□□□ -1.29
COMMD3-212ENST00000479958 LDLRAD3Q86YD5 345 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 TRMT2AQ8IZ69 625 aaKnown RBP7.01□□□□□ -1.29
COMMD3-212ENST00000479958 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.01□□□□□ -1.29
COMMD3-212ENST00000479958 REPS2Q8NFH8 660 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 COG1Q8WTW3 980 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 LANCL2Q9NS86 450 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 CCM2LQ9NUG4 571 aaPredicted RBP7.01□□□□□ -1.29
COMMD3-212ENST00000479958 TMEM140Q9NV12 185 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 PCDHGA2Q9Y5H1 932 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 GPR45Q9Y5Y3 372 aa7.01□□□□□ -1.29
COMMD3-212ENST00000479958 NPATQ14207 1427 aa7□□□□□ -1.29
COMMD3-212ENST00000479958 FAM171A2A8MVW0 826 aa7□□□□□ -1.29
COMMD3-212ENST00000479958 CXorf49A8MYA2 514 aaPredicted RBP7□□□□□ -1.29
COMMD3-212ENST00000479958 ADCY6O43306 1168 aa7□□□□□ -1.29
COMMD3-212ENST00000479958 MTNR1BP49286 362 aa7□□□□□ -1.29
COMMD3-212ENST00000479958 KRTAP5-3Q6L8H2 238 aa7□□□□□ -1.29
COMMD3-212ENST00000479958 DDX42Q86XP3 938 aaKnown RBP eCLIP7□□□□□ -1.29
COMMD3-212ENST00000479958 PRAG1Q86YV5 1406 aa7□□□□□ -1.29
COMMD3-212ENST00000479958 RNF169Q8NCN4 708 aa7□□□□□ -1.29
COMMD3-212ENST00000479958 SSH1Q8WYL5 1049 aa7□□□□□ -1.29
COMMD3-212ENST00000479958 ZNF768Q9H5H4 540 aaKnown RBP7□□□□□ -1.29
COMMD3-212ENST00000479958 CYP4F11Q9HBI6 524 aa7□□□□□ -1.29
COMMD3-212ENST00000479958 C11orf21Q9P2W6 132 aa7□□□□□ -1.29
COMMD3-212ENST00000479958 ATP11BQ9Y2G3 1177 aa7□□□□□ -1.29
COMMD3-212ENST00000479958 DRGXA6NNA5 263 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 TEX33O43247 280 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 NDUFA10O95299 355 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 ALOX15P16050 662 aaPredicted RBP6.99□□□□□ -1.29
COMMD3-212ENST00000479958 ZSCAN20P17040 1043 aaPredicted RBP6.99□□□□□ -1.29
COMMD3-212ENST00000479958 BMPR1AP36894 532 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 SREBF1P36956 1147 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 ERVK-21P61565 698 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 CLUL1Q15846 466 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 NECAB2Q7Z6G3 386 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 SYT12Q8IV01 421 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 RPUSD2Q8IZ73 545 aaKnown RBP6.99□□□□□ -1.29
COMMD3-212ENST00000479958 SLC35B2Q8TB61 432 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 PHACTR3Q96KR7 559 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 DNM3Q9UQ16 869 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 ATP8A1Q9Y2Q0 1164 aa6.99□□□□□ -1.29
COMMD3-212ENST00000479958 RALGAPBQ86X10 1494 aa6.98□□□□□ -1.29
COMMD3-212ENST00000479958 TMEM200CA6NKL6 621 aa6.98□□□□□ -1.29
COMMD3-212ENST00000479958 NCR1O76036 304 aa6.98□□□□□ -1.29
COMMD3-212ENST00000479958 POMCP01189 267 aa6.98□□□□□ -1.29
COMMD3-212ENST00000479958 GCP02774 474 aa6.98□□□□□ -1.29
COMMD3-212ENST00000479958 RAP2AP10114 183 aa6.98□□□□□ -1.29
COMMD3-212ENST00000479958 OSMP13725 252 aa6.98□□□□□ -1.29
COMMD3-212ENST00000479958 ATP5JP18859 108 aa6.98□□□□□ -1.29
COMMD3-212ENST00000479958 PPP3CAQ08209 521 aa6.98□□□□□ -1.29
COMMD3-212ENST00000479958 CSRP2Q16527 193 aa6.98□□□□□ -1.29
COMMD3-212ENST00000479958 ARMC6Q6NXE6 501 aa6.98□□□□□ -1.29
COMMD3-212ENST00000479958 PGM2L1Q6PCE3 622 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms