RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 FAM178BQ8IXR5 827 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 PHC3Q8NDX5 983 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 KIAA1586Q9HCI6 787 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 FAM86B1E9PN63 330 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 FAM86B2P0C5J1 330 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 CIITAP33076 1130 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 CACNA2D1P54289 1103 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 SESN3P58005 492 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 KPNB1Q14974 876 aaKnown RBP13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 GRIPAP1Q4V328 841 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 RFWD3Q6PCD5 774 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 DSTYKQ6XUX3 929 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 KSR1Q8IVT5 923 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 ZCCHC9Q8N567 271 aaKnown RBP13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 PPFIBP2Q8ND30 876 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 NRG4Q8WWG1 115 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 EZH1Q92800 747 aaPredicted RBP13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 TTC25Q96NG3 672 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 RBM15Q96T37 977 aaKnown RBP eCLIP13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 EPAS1Q99814 870 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 SYNCQ9H7C4 482 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 PPCSQ9HAB8 311 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 STX18Q9P2W9 335 aaKnown RBP13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 EMSYQ7Z589 1322 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 MSH4O15457 936 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 KCNA3P22001 575 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 RPA3P35244 121 aaPredicted RBP13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 SREBF1P36956 1147 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 FMO1Q01740 532 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 AP1B1Q10567 949 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 IZUMO3Q5VZ72 239 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 ZNF365Q70YC5 407 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 ARHGAP22Q7Z5H3 698 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 MTDHQ86UE4 582 aaKnown RBP13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 KIAA0825Q8IV33 1275 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 DTNBP1Q96EV8 351 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 HSD17B14Q9BPX1 270 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 MMADHCQ9H3L0 296 aaPredicted RBP13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 TUFT1Q9NNX1 390 aa13.8□□□□□ -0.2
LYSMD4-206ENST00000479791 GAKO14976 1311 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 IRF6O14896 467 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 GSC2O15499 205 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 RASA3Q14644 834 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 RASA2Q15283 850 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 LLGL1Q15334 1064 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 ACSBG2Q5FVE4 666 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 ZNF75CPQ92670 426 aaPredicted RBP13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 ZNF212Q9UDV6 495 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 FAM196BA6NMK8 535 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 EML1O00423 815 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 CAPN9O14815 690 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 TYROBPO43914 113 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 PSMG1O95456 288 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 FOSP01100 380 aaPredicted RBP13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 TROVE2P10155 538 aaKnown RBP eCLIP13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 CA4P22748 312 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 CCNG2Q16589 344 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 HHATQ5VTY9 493 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 PRUNE1Q86TP1 453 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 ZC3H18Q86VM9 953 aaKnown RBP13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 ARHGAP18Q8N392 663 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 PTPRN2Q92932 1015 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 NR1H4Q96RI1 486 aaPredicted RBP13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 P2RX7Q99572 595 aaKnown RBP13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 CCDC28BQ9BUN5 200 aa13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 SSU72Q9NP77 194 aaKnown RBP13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
LYSMD4-206ENST00000479791 KRT15P19012 456 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 VPS41P49754 854 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 SLC1A5Q15758 541 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 CYP4F22Q6NT55 531 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 NBPF5PQ86XG9 351 aaPredicted RBP13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 RDH13Q8NBN7 331 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 TMEM174Q8WUU8 243 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 PTCD3Q96EY7 689 aaKnown RBP13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 PCMTD2Q9NV79 361 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 KCND2Q9NZV8 630 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 ANKFY1Q9P2R3 1169 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 PMM2O15305 246 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 TBX10O75333 385 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 KRT36O76013 467 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 SLC1A1P43005 524 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 VAMP7P51809 220 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 DLG4P78352 724 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 PPP3CAQ08209 521 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 KLF1Q13351 362 aaPredicted RBP13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 PKN2Q16513 984 aaKnown RBP13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 TBC1D25Q3MII6 688 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 SYDE2Q5VT97 1194 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 STRA6Q9BX79 667 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 PPP1R12CQ9BZL4 782 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 NPHS2Q9NP85 383 aa13.78□□□□□ -0.2
LYSMD4-206ENST00000479791 PDLIM1O00151 329 aa13.77□□□□□ -0.2
LYSMD4-206ENST00000479791 MAP3K7O43318 606 aa13.77□□□□□ -0.2
LYSMD4-206ENST00000479791 PLEKHG4Q58EX7 1191 aa13.77□□□□□ -0.2
LYSMD4-206ENST00000479791 ODR4Q5SWX8 454 aa13.77□□□□□ -0.2
LYSMD4-206ENST00000479791 NSMFQ6X4W1 530 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms