RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CABP7Q86V35 215 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 SESTD1Q86VW0 696 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 ZDHHC13Q8IUH4 622 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 CCDC60Q8IWA6 550 aaPredicted RBP6.85□□□□□ -1.31
SF3B1-209ENST00000479532 C4orf19Q8IY42 314 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 TMEM130Q8N3G9 435 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 DIS3LQ8TF46 1054 aaKnown RBP6.85□□□□□ -1.31
SF3B1-209ENST00000479532 ATP8B4Q8TF62 1192 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 LEO1Q8WVC0 666 aaPredicted RBP6.85□□□□□ -1.31
SF3B1-209ENST00000479532 TTC9Q92623 222 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 CCDC34Q96HJ3 373 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 DYDC2Q96IM9 177 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 C16orf70Q9BSU1 422 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 FTOQ9C0B1 505 aaKnown RBP eCLIP6.85□□□□□ -1.31
SF3B1-209ENST00000479532 CSRNP2Q9H175 543 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 FBXO2Q9UK22 296 aaPredicted RBP6.85□□□□□ -1.31
SF3B1-209ENST00000479532 DNM3Q9UQ16 869 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 SCN10AQ9Y5Y9 1956 aa6.85□□□□□ -1.31
SF3B1-209ENST00000479532 ARHGEF35A5YM69 484 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 F8W735 103 aaPredicted RBP6.84□□□□□ -1.31
SF3B1-209ENST00000479532 HAS3O00219 553 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 MAGEB2O15479 319 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 SLITRK3O94933 977 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 LYPLA2O95372 231 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 SMIM10L2AP0DMW4 78 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 SMIM10L2BP0DMW5 78 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 ESRRAP11474 423 aaPredicted RBP6.84□□□□□ -1.31
SF3B1-209ENST00000479532 TFE3P19532 575 aaPredicted RBP6.84□□□□□ -1.31
SF3B1-209ENST00000479532 TMOD1P28289 359 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 YWHABP31946 246 aaKnown RBP6.84□□□□□ -1.31
SF3B1-209ENST00000479532 DNM2P50570 870 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 IGBP1P78318 339 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 CTTNQ14247 550 aaKnown RBP6.84□□□□□ -1.31
SF3B1-209ENST00000479532 PLCB4Q15147 1175 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 SNAP47Q5SQN1 464 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 AGMOQ6ZNB7 445 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 TRMT1LQ7Z2T5 733 aaKnown RBP6.84□□□□□ -1.31
SF3B1-209ENST00000479532 RSPH3Q86UC2 560 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 CATSPER3Q86XQ3 398 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 PDCL2Q8N4E4 241 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 SLC7A3Q8WY07 619 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 KAT2BQ92831 832 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 PDLIM2Q96JY6 352 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 CEP170P1Q96L14 293 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 PCYT2Q99447 389 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 HSD17B14Q9BPX1 270 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 ANKEF1Q9NU02 776 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 RGL1Q9NZL6 768 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 HDAC6Q9UBN7 1215 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 GTF2IRD1Q9UHL9 959 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 RCOR1Q9UKL0 485 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 ATP11BQ9Y2G3 1177 aa6.84□□□□□ -1.31
SF3B1-209ENST00000479532 ARID2Q68CP9 1835 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 M0QZ92 97 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 DLL1O00548 723 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 GAS2O43903 313 aaKnown RBP6.83□□□□□ -1.32
SF3B1-209ENST00000479532 PQBP1O60828 265 aaKnown RBP6.83□□□□□ -1.32
SF3B1-209ENST00000479532 DEAF1O75398 565 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-209ENST00000479532 MED24O75448 989 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 PTMAP06454 111 aaKnown RBP6.83□□□□□ -1.32
SF3B1-209ENST00000479532 INSRRP14616 1297 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 GARTP22102 1010 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 NME2P22392 152 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 CDC25BP30305 580 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 STAT6P42226 847 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 POLGP54098 1239 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-209ENST00000479532 RTP1P59025 263 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 RPS26P62854 115 aaKnown RBP6.83□□□□□ -1.32
SF3B1-209ENST00000479532 LMNB2Q03252 620 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 BFSP2Q13515 415 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 CAMK2GQ13555 558 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-209ENST00000479532 IKBKEQ14164 716 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 SNX17Q15036 470 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 SYCP1Q15431 976 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 IL17AQ16552 155 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 PTGISQ16647 500 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 UGCGQ16739 394 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 TRIM60Q495X7 471 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 MTERF2Q49AM1 385 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 XKR9Q5GH70 373 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 HYIQ5T013 277 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 RRAGBQ5VZM2 374 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 ADALQ6DHV7 355 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 TAF2Q6P1X5 1199 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 FBXL19Q6PCT2 694 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 CCDC73Q6ZRK6 1079 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 ANKRD33Q7Z3H0 272 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 SULF2Q8IWU5 870 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 TCP11Q8WWU5 503 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 DPF3Q92784 378 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 EAF1Q96JC9 268 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-209ENST00000479532 TOX2Q96NM4 488 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 CLIC6Q96NY7 704 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 CCSER1Q9C0I3 900 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 LRRC27Q9C0I9 530 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 RNPEPQ9H4A4 650 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 CYP26B1Q9NR63 512 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 DDX19AQ9NUU7 478 aaKnown RBP6.83□□□□□ -1.32
SF3B1-209ENST00000479532 TUBE1Q9UJT0 475 aa6.83□□□□□ -1.32
SF3B1-209ENST00000479532 DBR1Q9UK59 544 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms