RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PDCD11Q14690 1871 aaKnown RBP22.22■■□□□ 1.15
VARS-224ENST00000479051 ZNF233A6NK53 670 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 PER2O15055 1255 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 EFEMP2O95967 443 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 CREMQ03060 361 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 SURF1Q15526 300 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 PTPN14Q15678 1187 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 ZBTB6Q15916 424 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 JADE1Q6IE81 842 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.22■■□□□ 1.151e-8■■■■■ 28.3
VARS-224ENST00000479051 C12orf56Q8IXR9 622 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 GPR65Q8IYL9 337 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 EFHBQ8N7U6 833 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 XXYLT1Q8NBI6 393 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.22■■□□□ 1.15
VARS-224ENST00000479051 COL6A3P12111 3177 aa22.22■■□□□ 1.15
VARS-224ENST00000479051 GOLGA6L22H0YM25 854 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 C2CD2LO14523 706 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 CLIC2O15247 247 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 CALUO43852 315 aaPredicted RBP22.21■■□□□ 1.15
VARS-224ENST00000479051 NFICP08651 508 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 LRPAP1P30533 357 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 CYP2J2P51589 502 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 DSG1Q02413 1049 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 COL19A1Q14993 1142 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 FAM171A1Q5VUB5 890 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 SPATA1Q5VX52 437 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 PDXDC1Q6P996 788 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 TAS1R1Q7RTX1 841 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 PPFIBP1Q86W92 1011 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 ATXN2LQ8WWM7 1075 aaKnown RBP22.21■■□□□ 1.15
VARS-224ENST00000479051 AUTS2Q8WXX7 1259 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 TTPALQ9BTX7 342 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 PRDM6Q9NQX0 595 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 CHST7Q9NS84 486 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 PCDHA5Q9Y5H7 936 aa22.21■■□□□ 1.15
VARS-224ENST00000479051 PDXKO00764 312 aa22.2■■□□□ 1.14
VARS-224ENST00000479051 GTF2F1P35269 517 aaKnown RBP eCLIP22.2■■□□□ 1.14
VARS-224ENST00000479051 NDUFV1P49821 464 aa22.2■■□□□ 1.14
VARS-224ENST00000479051 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.2■■□□□ 1.14
VARS-224ENST00000479051 GUF1Q8N442 669 aaKnown RBP22.2■■□□□ 1.14
VARS-224ENST00000479051 CACTINQ8WUQ7 758 aaKnown RBP22.2■■□□□ 1.14
VARS-224ENST00000479051 RIN2Q8WYP3 895 aaPredicted RBP22.2■■□□□ 1.14
VARS-224ENST00000479051 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.19■■□□□ 1.14
VARS-224ENST00000479051 EXOC3O60645 756 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 ADH1AP07327 375 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 KCNA5P22460 613 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 PAX3P23760 479 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 MCM4P33991 863 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 MRPS5P82675 430 aaKnown RBP22.19■■□□□ 1.14
VARS-224ENST00000479051 ADAM15Q13444 863 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 SNRNP35Q16560 246 aaKnown RBP22.19■■□□□ 1.14
VARS-224ENST00000479051 CTC1Q2NKJ3 1217 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 ZNF658Q5TYW1 1059 aaPredicted RBP22.19■■□□□ 1.14
VARS-224ENST00000479051 KIAA0319Q5VV43 1072 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 CEP57Q86XR8 500 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 CBWD2Q8IUF1 395 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 ZSWIM2Q8NEG5 633 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 FBXL18Q96ME1 805 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 KCTD10Q9H3F6 313 aa22.19■■□□□ 1.14
VARS-224ENST00000479051 CLASP2O75122 1294 aaKnown RBP22.18■■□□□ 1.14
VARS-224ENST00000479051 KLRC2P26717 231 aa22.18■■□□□ 1.14
VARS-224ENST00000479051 TFAMQ00059 246 aaKnown RBP22.18■■□□□ 1.14
VARS-224ENST00000479051 MYBPC2Q14324 1141 aa22.18■■□□□ 1.14
VARS-224ENST00000479051 C3orf58Q8NDZ4 430 aa22.18■■□□□ 1.14
VARS-224ENST00000479051 SPATA20Q8TB22 786 aa22.18■■□□□ 1.14
VARS-224ENST00000479051 CASP10Q92851 521 aa22.18■■□□□ 1.14
VARS-224ENST00000479051 DPP3Q9NY33 737 aa22.18■■□□□ 1.14
VARS-224ENST00000479051 MAPK8IP1Q9UQF2 711 aa22.18■■□□□ 1.14
VARS-224ENST00000479051 LILRB3O75022 631 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 CNPP09543 421 aaKnown RBP22.17■■□□□ 1.14
VARS-224ENST00000479051 BRCC3P46736 316 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 STIM1Q13586 685 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 ELMSAN1Q6PJG2 1045 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 SLC9A9Q8IVB4 645 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 RDH13Q8NBN7 331 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 PIK3R5Q8WYR1 880 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 ERCC4Q92889 916 aaPredicted RBP22.17■■□□□ 1.14
VARS-224ENST00000479051 B3GALT6Q96L58 329 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 KLHL5Q96PQ7 755 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 FNBP1Q96RU3 617 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 RXFP1Q9HBX9 757 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 PDE11AQ9HCR9 933 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 R3HCC1Q9Y3T6 440 aaKnown RBP22.17■■□□□ 1.14
VARS-224ENST00000479051 ANK1P16157 1881 aa22.17■■□□□ 1.14
VARS-224ENST00000479051 ARHGEF37A1IGU5 675 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 SYN3O14994 580 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 LINC01565O15544 149 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 NR3C1P04150 777 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 TMEM191BP0C7N4 346 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 FGFR3P22607 806 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 RPL13P26373 211 aaKnown RBP22.16■■□□□ 1.14
VARS-224ENST00000479051 PPP1R2P41236 205 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 GUCY2FP51841 1108 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 TFF2Q03403 129 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 PSMD5Q16401 504 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 PUS10Q3MIT2 529 aaKnown RBP22.16■■□□□ 1.14
VARS-224ENST00000479051 LEXMQ3ZCV2 418 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 RTP2Q5QGT7 225 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 C9orf57Q5W0N0 161 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms