RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	POTED	Q86YR6	584 aa		11.69	□□□□□ -0.54
APTX-222	ENST00000478279	MFSD6L	Q8IWD5	586 aa		11.69	□□□□□ -0.54
APTX-222	ENST00000478279	SLFN12	Q8IYM2	578 aa		11.69	□□□□□ -0.54
APTX-222	ENST00000478279	FAM160A2	Q8N612	972 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-222	ENST00000478279	DEPDC1B	Q8WUY9	529 aa		11.69	□□□□□ -0.54
APTX-222	ENST00000478279	SMARCD2	Q92925	531 aa		11.69	□□□□□ -0.54
APTX-222	ENST00000478279	DDX27	Q96GQ7	796 aa	Known RBP	11.69	□□□□□ -0.54
APTX-222	ENST00000478279	CCDC43	Q96MW1	224 aa	Known RBP	11.69	□□□□□ -0.54
APTX-222	ENST00000478279	NAP1L4	Q99733	375 aa	Known RBP	11.69	□□□□□ -0.54
APTX-222	ENST00000478279	HSD17B14	Q9BPX1	270 aa		11.69	□□□□□ -0.54
APTX-222	ENST00000478279	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.69	□□□□□ -0.54
APTX-222	ENST00000478279	FZD8	Q9H461	694 aa		11.69	□□□□□ -0.54
APTX-222	ENST00000478279	PDZD7	Q9H5P4	517 aa		11.69	□□□□□ -0.54
APTX-222	ENST00000478279	TRPV4	Q9HBA0	871 aa		11.69	□□□□□ -0.54
APTX-222	ENST00000478279	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-222	ENST00000478279	TRIP11	Q15643	1979 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	LRRIQ4	A6NIV6	560 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	TTLL13P	A6NNM8	815 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	ZNF263	O14978	683 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	BAG4	O95429	457 aa	Known RBP	11.68	□□□□□ -0.54
APTX-222	ENST00000478279	CCR2	P41597	374 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	RARRES1	P49788	294 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	COL9A2	Q14055	689 aa	Predicted RBP	11.68	□□□□□ -0.54
APTX-222	ENST00000478279	CYP4A22	Q5TCH4	519 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.68	□□□□□ -0.54
APTX-222	ENST00000478279	HEATR6	Q6AI08	1181 aa	Known RBP	11.68	□□□□□ -0.54
APTX-222	ENST00000478279	C1orf228	Q6PIY5	440 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	CD300LG	Q6UXG3	332 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	NOSTRIN	Q8IVI9	506 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	ZBTB8OS	Q8IWT0	167 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	TCEAL8	Q8IYN2	117 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	MSANTD3	Q96H12	275 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	ZSWIM3	Q96MP5	696 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	UROC1	Q96N76	676 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	AIFM3	Q96NN9	605 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	CYP4F11	Q9HBI6	524 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	KCNJ14	Q9UNX9	436 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	SNX14	Q9Y5W7	946 aa		11.68	□□□□□ -0.54
APTX-222	ENST00000478279	DSP	P15924	2871 aa	Known RBP	11.67	□□□□□ -0.54
APTX-222	ENST00000478279	ARNTL	O00327	626 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	CPLX1	O14810	134 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	MOSPD3	O75425	235 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	SEC24A	O95486	1093 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	ZNF806	P0C7X5	589 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	XRCC6	P12956	609 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
APTX-222	ENST00000478279	ATF2	P15336	505 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	HOXA6	P31267	233 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	VIPR2	P41587	438 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	BRCC3	P46736	316 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	CLCNKB	P51801	687 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	PRPF4B	Q13523	1007 aa	Known RBP	11.67	□□□□□ -0.54
APTX-222	ENST00000478279	SF3A2	Q15428	464 aa	Known RBP	11.67	□□□□□ -0.54
APTX-222	ENST00000478279	UPP1	Q16831	310 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	TMEM132A	Q24JP5	1023 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	DGKK	Q5KSL6	1271 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	C12orf50	Q8NA57	414 aa	Predicted RBP	11.67	□□□□□ -0.54
APTX-222	ENST00000478279	CSGALNACT1	Q8TDX6	532 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	LOXL4	Q96JB6	756 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	PPP1R10	Q96QC0	940 aa	Known RBP	11.67	□□□□□ -0.54
APTX-222	ENST00000478279	ADPGK	Q9BRR6	497 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	ARRDC1-AS1	Q9H2J1	176 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.67	□□□□□ -0.54
APTX-222	ENST00000478279	GPRC5C	Q9NQ84	441 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	RBM12	Q9NTZ6	932 aa	Known RBP	11.67	□□□□□ -0.54
APTX-222	ENST00000478279	DAXX	Q9UER7	740 aa	Predicted RBP	11.67	□□□□□ -0.54
APTX-222	ENST00000478279	GDA	Q9Y2T3	454 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	INSL5	Q9Y5Q6	135 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	WDFY3	Q8IZQ1	3526 aa		11.67	□□□□□ -0.54
APTX-222	ENST00000478279	PKD1L2	Q7Z442	2459 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	PDCD11	Q14690	1871 aa	Known RBP	11.66	□□□□□ -0.54
APTX-222	ENST00000478279	HEPACAM2	A8MVW5	462 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279		I3L4J1	428 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	ACKR2	O00590	384 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	AXIN1	O15169	862 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	USO1	O60763	962 aa	Known RBP	11.66	□□□□□ -0.54
APTX-222	ENST00000478279	KCNK5	O95279	499 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	PSMA5	P28066	241 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	HSPA4	P34932	840 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	ARPP19	P56211	112 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	MAPK6	Q16659	721 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	GLRA4	Q5JXX5	417 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	STPG1	Q5TH74	334 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	TPGS2	Q68CL5	300 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	IQCE	Q6IPM2	695 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	CPLX2	Q6PUV4	134 aa	Known RBP	11.66	□□□□□ -0.54
APTX-222	ENST00000478279	MAEA	Q7L5Y9	396 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	WDR5B	Q86VZ2	330 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	HS6ST3	Q8IZP7	471 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	ELMOD1	Q8N336	334 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	MCPH1	Q8NEM0	835 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.66	□□□□□ -0.54
APTX-222	ENST00000478279	PIGO	Q8TEQ8	1089 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	E2F7	Q96AV8	911 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	ZNF512	Q96ME7	567 aa	Predicted RBP	11.66	□□□□□ -0.54
APTX-222	ENST00000478279	C2orf40	Q9H1Z8	148 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	RXFP3	Q9NSD7	469 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	PCDHA12	Q9UN75	941 aa		11.66	□□□□□ -0.54
APTX-222	ENST00000478279	NCAN	O14594	1321 aa		11.65	□□□□□ -0.54
APTX-222	ENST00000478279	LAMA5	O15230	3695 aa		11.65	□□□□□ -0.54
APTX-222	ENST00000478279		H7C4K7	107 aa		11.65	□□□□□ -0.54

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