RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ATG13O75143 517 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 ERLIN2O94905 339 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 TRIM16O95361 564 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 LRG1P02750 347 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 ATF2P15336 505 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 NPEPPSP55786 919 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 PTENP60484 403 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 SIM1P81133 766 aaPredicted RBP8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 HDAC1Q13547 482 aaPredicted RBP8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 ELF2Q15723 593 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 NAB2Q15742 525 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 AMHR2Q16671 573 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 CYP4A22Q5TCH4 519 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 CASC1Q6TDU7 716 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 CD300LGQ6UXG3 332 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 PDZD4Q76G19 769 aaPredicted RBP8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 RAB44Q7Z6P3 723 aaPredicted RBP8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 PIP4P1Q86T03 277 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 FERMT3Q86UX7 667 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 TCEAL8Q8IYN2 117 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 CHCHD4Q8N4Q1 142 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 RNF149Q8NC42 400 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 EXOC6Q8TAG9 804 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 PSPC1Q8WXF1 523 aaKnown RBP8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 SLC7A3Q8WY07 619 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 E2F7Q96AV8 911 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 TMEM87BQ96K49 555 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 SLC32A1Q9H598 525 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 DHX33Q9H6R0 707 aaKnown RBP8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 SCUBE2Q9NQ36 999 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 POLR3BQ9NW08 1133 aaPredicted RBP8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 SNTG2Q9NY99 539 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 SLC8A2Q9UPR5 921 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 ADAMTS20P59510 1910 aa8.15□□□□□ -1.11
SPTLC1-205ENST00000477888 COL4A2P08572 1712 aa8.15□□□□□ -1.11
SPTLC1-205ENST00000477888 A0A1B0GUA9 196 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 UPK3BL1B0FP48 263 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 UPK3BL2E5RIL1 263 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 PTGESO14684 152 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 ASAP2O43150 1006 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 C1QL1O75973 258 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 SEC24BO95487 1268 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 PRB1P04280 392 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 GJA1P17302 382 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 ARF4P18085 180 aaPredicted RBP8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 MCM5P33992 734 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 EPHA5P54756 1037 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 PSMC5P62195 406 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 ROR1Q01973 937 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 UAP1L1Q3KQV9 507 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 LRCH2Q5VUJ6 765 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 PLA2G4FQ68DD2 849 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 SLC8B1Q6J4K2 584 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 MIER3Q7Z3K6 550 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 SGMS1Q86VZ5 419 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 HACE1Q8IYU2 909 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 TTC8Q8TAM2 541 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 LRIG1Q96JA1 1093 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 MKNK1Q9BUB5 465 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 TEKT3Q9BXF9 490 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 MFRPQ9BY79 579 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 TRIM6Q9C030 488 aaPredicted RBP8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 GPR88Q9GZN0 384 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 ZMYND12Q9H0C1 365 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 CXCL16Q9H2A7 254 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 CEP72Q9P209 647 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 PARP2Q9UGN5 583 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 EBF1Q9UH73 591 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 KALRNO60229 2985 aa8.14□□□□□ -1.11
SPTLC1-205ENST00000477888 CCDC194A0A1B0GVG4 234 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 ESYT2A0FGR8 921 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 PRRG1O14668 218 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 SEC24AO95486 1093 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 PLA2G2AP14555 144 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 ELF1P32519 619 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 RDXP35241 583 aaKnown RBP8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 USP11P51784 963 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 FAM193AP78312 1265 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 MBTD1Q05BQ5 628 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 POU5F1BQ06416 359 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 NCBP1Q09161 790 aaKnown RBP8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 SEMA3BQ13214 749 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 TEAD2Q15562 447 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 TMEM196Q5HYL7 178 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 PMS2CLQ68D20 193 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 FSTL4Q6MZW2 842 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 SLC27A1Q6PCB7 646 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 ANKS3Q6ZW76 656 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 CDR2LQ86X02 465 aaPredicted RBP8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 MICU3Q86XE3 530 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 LURAP1LQ8IV03 231 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 YAF2Q8IY57 180 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 EXOC8Q8IYI6 725 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 LEMD2Q8NC56 503 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 FAM200AQ8TCP9 573 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 DDX27Q96GQ7 796 aaKnown RBP8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 CCDC136Q96JN2 1154 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 ZFYVE19Q96K21 471 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 TMEM209Q96SK2 561 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 CCDC86Q9H6F5 360 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms