RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 PSPC1Q8WXF1 523 aaKnown RBP10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 SLC7A3Q8WY07 619 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 GJA10Q969M2 543 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 TMEM143Q96AN5 459 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 LENG9Q96B70 501 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 CCDC51Q96ER9 411 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 LRIG1Q96JA1 1093 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 TEKT3Q9BXF9 490 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 SLC32A1Q9H598 525 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 BARHL2Q9NY43 387 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 MTRRQ9UBK8 725 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 DAXXQ9UER7 740 aaPredicted RBP10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 CYP46A1Q9Y6A2 500 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 VWA8A3KMH1 1905 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 NAV2Q8IVL1 2488 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 ARHGEF37A1IGU5 675 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 PATE3B3GLJ2 98 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 PRRG1O14668 218 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 ADAMTS3O15072 1205 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 CHADO15335 359 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 GJA1P17302 382 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 ELF1P32519 619 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 NEK4P51957 841 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 SIM1P81133 766 aaPredicted RBP10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 NCBP1Q09161 790 aaKnown RBP10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 SCAPQ12770 1279 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 ELAVL2Q12926 359 aaKnown RBP10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 ANO5Q75V66 913 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 RALGPS2Q86X27 583 aaPredicted RBP10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 HS6ST3Q8IZP7 471 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 CHCHD4Q8N4Q1 142 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 SNX21Q969T3 373 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 IPO9Q96P70 1041 aaKnown RBP10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 RIT2Q99578 217 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 TRPV4Q9HBA0 871 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 ZSWIM6Q9HCJ5 1215 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 BMP2KQ9NSY1 1161 aaPredicted RBP10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 CACNA2D2Q9NY47 1150 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 GTSE1Q9NYZ3 720 aa10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 V9GY48 417 aaPredicted RBP10.76□□□□□ -0.69
SMARCB1-206ENST00000477836 FAM221BA6H8Z2 402 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 H0Y626 953 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 hCG_1984214I3L0E3 225 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 TRIM16O95361 564 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 NPTXRO95502 500 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 PRB1P04280 392 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 MYL4P12829 197 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 RPS6KB1P23443 525 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 GBP1P32455 592 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 CIITAP33076 1130 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 RDXP35241 583 aaKnown RBP10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 LIFRP42702 1097 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 MCM2P49736 904 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 NPEPPSP55786 919 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 RUFY3Q7L099 469 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 CDR2LQ86X02 465 aaPredicted RBP10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 GPIHBP1Q8IV16 184 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 ZNF713Q8N859 430 aaPredicted RBP10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 RSPRY1Q96DX4 576 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 TMEM87BQ96K49 555 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 MTA3Q9BTC8 594 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 SLITRK6Q9H5Y7 841 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 PDRG1Q9NUG6 133 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 POLR3BQ9NW08 1133 aaPredicted RBP10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 SNTG2Q9NY99 539 aa10.75□□□□□ -0.69
SMARCB1-206ENST00000477836 NUP205Q92621 2012 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 INO80B-WBP1J3KQ70 363 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 K7ELQ4 463 aaPredicted RBP10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 ATG13O75143 517 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 MOSPD3O75425 235 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 CPA1P15085 419 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 FGFR3P22607 806 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 MCM5P33992 734 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 IRX4P78413 519 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 FCHO2Q0JRZ9 810 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 KARSQ15046 597 aaKnown RBP10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 PCBP1Q15365 356 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 IQCEQ6IPM2 695 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 ELMOD1Q8N336 334 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 CAMKK1Q8N5S9 505 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 RDM1Q8NG50 284 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 ZNF461Q8TAF7 563 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 SLC5A5Q92911 643 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 E2F7Q96AV8 911 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 ZFYVE19Q96K21 471 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 HHIPQ96QV1 700 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 LRRC2Q9BYS8 371 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 CCDC86Q9H6F5 360 aaKnown RBP10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 CYP4F11Q9HBI6 524 aa10.74□□□□□ -0.69
SMARCB1-206ENST00000477836 MEFVO15553 781 aaPredicted RBP10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 ASAP2O43150 1006 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 CD2BP2O95400 341 aaKnown RBP10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 ARF4P18085 180 aaPredicted RBP10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 TKTP29401 623 aaKnown RBP10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 MAPK8P45983 427 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 ARPP19P56211 112 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 ROR1Q01973 937 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 ANKRD1Q15327 319 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms