RNA–Protein interactions for RNA: ENST00000477692.6

EXOSC1-209, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-209ENST00000477692 RABGGTAQ92696 567 aa14.3□□□□□ -0.12
EXOSC1-209ENST00000477692 DDX27Q96GQ7 796 aaKnown RBP14.3□□□□□ -0.12
EXOSC1-209ENST00000477692 TMEM169Q96HH4 297 aa14.3□□□□□ -0.12
EXOSC1-209ENST00000477692 DUSP9Q99956 384 aaKnown RBP14.3□□□□□ -0.12
EXOSC1-209ENST00000477692 LMAN2LQ9H0V9 348 aa14.3□□□□□ -0.12
EXOSC1-209ENST00000477692 RWDD2AQ9UIY3 292 aa14.3□□□□□ -0.12
EXOSC1-209ENST00000477692 TMEM189-UBE2V1I3L0A0 370 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 PODXLO00592 558 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 KIF4AO95239 1232 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 EFEMP2O95967 443 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 DNAJB1P25685 340 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 STX17P56962 302 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 MCCD1P59942 119 aaPredicted RBP14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 KRT17Q04695 432 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 DCLRE1AQ6PJP8 1040 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 SASS6Q6UVJ0 657 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 CD300LGQ6UXG3 332 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 DDX53Q86TM3 631 aaKnown RBP14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 WDR49Q8IV35 697 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 FAM186BQ8IYM0 893 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 C3orf58Q8NDZ4 430 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 CACTINQ8WUQ7 758 aaKnown RBP14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 POF1BQ8WVV4 589 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 CCDC127Q96BQ5 260 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 GUCD1Q96NT3 240 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 MED15Q96RN5 788 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 CGRRF1Q99675 332 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 MKNK1Q9BUB5 465 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 VN1R3Q9BXE9 311 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 INTS13Q9NVM9 706 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 MTMR10Q9NXD2 777 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 DPP3Q9NY33 737 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 DACH1Q9UI36 760 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 ADAM28Q9UKQ2 775 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 LZTS1Q9Y250 596 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 PTPRJQ12913 1337 aa14.29□□□□□ -0.12
EXOSC1-209ENST00000477692 TULP1O00294 542 aaPredicted RBP14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 SLC16A3O15427 465 aaKnown RBP14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 TADA2AO75478 443 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 DLATP10515 647 aaKnown RBP14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 IGFBP6P24592 240 aaPredicted RBP14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 ERCC5P28715 1186 aaPredicted RBP14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 CLDN10P78369 228 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 TFAMQ00059 246 aaKnown RBP14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 ENPEPQ07075 957 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 CAMK1Q14012 370 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 ADGRE1Q14246 886 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 CT47A1Q5JQC4 288 aaPredicted RBP14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 C9orf57Q5W0N0 161 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 LMBRD2Q68DH5 695 aaPredicted RBP14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 RNF168Q8IYW5 571 aaPredicted RBP14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 OR5B17Q8NGF7 314 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 PARD3BQ8TEW8 1205 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 EEF2KMTQ96G04 330 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 BORCS6Q96GS4 357 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 FAM84AQ96KN4 292 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 CEP63Q96MT8 703 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 FNBP1Q96RU3 617 aa14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 POP1Q99575 1024 aaKnown RBP14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 CDX2Q99626 313 aaPredicted RBP14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 PUF60Q9UHX1 559 aaKnown RBP14.28□□□□□ -0.12
EXOSC1-209ENST00000477692 TRANK1O15050 2925 aa14.27□□□□□ -0.12
EXOSC1-209ENST00000477692 ANO9A1A5B4 782 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 LRRIQ3A6PVS8 624 aaPredicted RBP14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 PIRO00625 290 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 B3GAT3O94766 335 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 LETM1O95202 739 aaPredicted RBP14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 TMEM191BP0C7N4 346 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 EPB41P11171 864 aaKnown RBP14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 TNNI1P19237 187 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 POU3F3P20264 500 aaPredicted RBP14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 STX1AQ16623 288 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 DUOXA2Q1HG44 320 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 FUT10Q6P4F1 479 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 INTS8Q75QN2 995 aaKnown RBP14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 FILIP1Q7Z7B0 1213 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 CSGALNACT2Q8N6G5 542 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 C1orf127Q8N9H9 656 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 CXorf38Q8TB03 319 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 TMC2Q8TDI7 906 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 HASPINQ8TF76 798 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 MYLIPQ8WY64 445 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 ZNF516Q92618 1163 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 ANKRD36BP1Q96IX9 119 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 MTMR12Q9C0I1 747 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 ANO10Q9NW15 660 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 LMCD1Q9NZU5 365 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 STK39Q9UEW8 545 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 SCN1AP35498 2009 aa14.27□□□□□ -0.13
EXOSC1-209ENST00000477692 MYO9BQ13459 2157 aa14.26□□□□□ -0.13
EXOSC1-209ENST00000477692 SF3B1O75533 1304 aaKnown RBP eCLIP14.26□□□□□ -0.13
EXOSC1-209ENST00000477692 VWA8A3KMH1 1905 aa14.26□□□□□ -0.13
EXOSC1-209ENST00000477692 PPEF2O14830 753 aa14.26□□□□□ -0.13
EXOSC1-209ENST00000477692 FSCN2O14926 492 aa14.26□□□□□ -0.13
EXOSC1-209ENST00000477692 TNNC2P02585 160 aa14.26□□□□□ -0.13
EXOSC1-209ENST00000477692 SOD2P04179 222 aa14.26□□□□□ -0.13
EXOSC1-209ENST00000477692 KRT13P13646 458 aa14.26□□□□□ -0.13
EXOSC1-209ENST00000477692 VAMP7P51809 220 aa14.26□□□□□ -0.13
EXOSC1-209ENST00000477692 AP3M2P53677 418 aa14.26□□□□□ -0.13
EXOSC1-209ENST00000477692 ERVFC1P60507 584 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms