RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.42□□□□□ -1.54
CKS1B-207ENST00000477676 ACAD9Q9H845 621 aa5.42□□□□□ -1.54
CKS1B-207ENST00000477676 CNNM2Q9H8M5 875 aa5.42□□□□□ -1.54
CKS1B-207ENST00000477676 EHMT1Q9H9B1 1298 aa5.42□□□□□ -1.54
CKS1B-207ENST00000477676 SMPD4Q9NXE4 827 aa5.42□□□□□ -1.54
CKS1B-207ENST00000477676 FBXO40Q9UH90 709 aa5.42□□□□□ -1.54
CKS1B-207ENST00000477676 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.42□□□□□ -1.54
CKS1B-207ENST00000477676 SLC4A7Q9Y6M7 1214 aa5.42□□□□□ -1.54
CKS1B-207ENST00000477676 MYO10Q9HD67 2058 aa5.42□□□□□ -1.54
CKS1B-207ENST00000477676 RIF1Q5UIP0 2472 aaKnown RBP5.41□□□□□ -1.54
CKS1B-207ENST00000477676 RALGAPA2Q2PPJ7 1873 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 A0A1B0GTL3 188 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 FAM86C2PA6NEL3 165 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 ASB14A6NK59 587 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 MEIS1O00470 390 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 RNF113AO15541 343 aaKnown RBP5.41□□□□□ -1.54
CKS1B-207ENST00000477676 PLA2G6O60733 806 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 CABYRO75952 493 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 ATP2A2P16615 1042 aaKnown RBP5.41□□□□□ -1.54
CKS1B-207ENST00000477676 PRKCAP17252 672 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 IGFBP6P24592 240 aaPredicted RBP5.41□□□□□ -1.54
CKS1B-207ENST00000477676 NOVP48745 357 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 PURAQ00577 322 aaKnown RBP5.41□□□□□ -1.54
CKS1B-207ENST00000477676 TFAP4Q01664 338 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 APOBRQ0VD83 1088 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 GRB10Q13322 594 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 BAATQ14032 418 aaPredicted RBP5.41□□□□□ -1.54
CKS1B-207ENST00000477676 TARBP2Q15633 366 aaKnown RBP5.41□□□□□ -1.54
CKS1B-207ENST00000477676 DUSP28Q4G0W2 176 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 VPS53Q5VIR6 699 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 HLA-DQA1Q5Y7H0 255 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 IQSEC1Q6DN90 963 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 OVOS1Q6IE37 1185 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 NOL8Q76FK4 1167 aaKnown RBP5.41□□□□□ -1.54
CKS1B-207ENST00000477676 DEFB128Q7Z7B8 93 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 AMOTL1Q8IY63 956 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 NUP43Q8NFH3 380 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 FBXO27Q8NI29 283 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 STAG1Q8WVM7 1258 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 CLEC4DQ8WXI8 215 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 PRDM14Q9GZV8 571 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 SCAND2PQ9GZW5 306 aaPredicted RBP5.41□□□□□ -1.54
CKS1B-207ENST00000477676 SPC25Q9HBM1 224 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 TNKSO95271 1327 aa5.41□□□□□ -1.54
CKS1B-207ENST00000477676 ZFHX2Q9C0A1 2572 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-207ENST00000477676 DNAH14Q0VDD8 3507 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 FADS2P1A8MWK0 482 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 NUDT19A8MXV4 375 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 HMMRO75330 724 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 ARIH2O95376 493 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 ITGB3P05106 788 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 GSNP06396 782 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 IQCF3P0C7M6 154 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 IMPDH2P12268 514 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 SLC16A2P36021 539 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 ALDH5A1P51649 535 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-207ENST00000477676 STAT2P52630 851 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 PPARAQ07869 468 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 CBX2Q14781 532 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-207ENST00000477676 TKFCQ3LXA3 575 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 HSF5Q4G112 596 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-207ENST00000477676 RCSD1Q6JBY9 416 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 ZSCAN25Q6NSZ9 544 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 FBXL19Q6PCT2 694 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 NSMFQ6X4W1 530 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 SLC30A10Q6XR72 485 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 GK5Q6ZS86 529 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 LSRQ86X29 649 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-207ENST00000477676 RPUSD2Q8IZ73 545 aaKnown RBP5.4□□□□□ -1.54
CKS1B-207ENST00000477676 ZNF444Q8N0Y2 327 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-207ENST00000477676 CHURC1Q8WUH1 139 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 ARNTL2Q8WYA1 636 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 FAM122AQ96E09 287 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 SPATA25Q9BR10 227 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 MENTQ9BUN1 341 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 WDR11Q9BZH6 1224 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 LRRCC1Q9C099 1032 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 AP5M1Q9H0R1 490 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 RANBP17Q9H2T7 1088 aaKnown RBP5.4□□□□□ -1.54
CKS1B-207ENST00000477676 VTA1Q9NP79 307 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 ECHDC1Q9NTX5 307 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 GGT7Q9UJ14 662 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 DDX19BQ9UMR2 479 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 SYNPO2Q9UMS6 1093 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 GPR55Q9Y2T6 319 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-207ENST00000477676 Q9Y3F1 56 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 DUSP10Q9Y6W6 482 aa5.4□□□□□ -1.54
CKS1B-207ENST00000477676 WDR81Q562E7 1941 aa5.4□□□□□ -1.55
CKS1B-207ENST00000477676 PTPRZ1P23471 2315 aaPredicted RBP5.4□□□□□ -1.55
CKS1B-207ENST00000477676 TTC3P53804 2025 aa5.4□□□□□ -1.55
CKS1B-207ENST00000477676 C1QTNF3-AMACRE9PGA6 284 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 GREM1O60565 184 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 DNAJA2O60884 412 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 ICAM1P05362 532 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 MYL3P08590 195 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 FGRP09769 529 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 TSPY3P0CV98 308 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 TSPY8P0CW00 308 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 EDNRBP24530 442 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 SLC1A4P43007 532 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms