RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 MAP2K2P36507 400 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 NAMPTP43490 491 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 MARSP56192 900 aaKnown RBP15.5■□□□□ 0.07
HDAC6-220ENST00000477528 CYP24A1Q07973 514 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 DNAAF5Q86Y56 855 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 ARL8AQ96BM9 186 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 FOXP3Q9BZS1 431 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 NIF3L1Q9GZT8 377 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-220ENST00000477528 ASTN1O14525 1302 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 KRT37O76014 449 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 NUP188Q5SRE5 1749 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 TACO1Q9BSH4 297 aaKnown RBP15.5■□□□□ 0.07
HDAC6-220ENST00000477528 WDR18Q9BV38 432 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 ROPN1BQ9BZX4 212 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-220ENST00000477528 ROPN1Q9HAT0 212 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-220ENST00000477528 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.5■□□□□ 0.07
HDAC6-220ENST00000477528 MAPK13O15264 365 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 ASAP2O43150 1006 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 CCDC38Q502W7 563 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 SDCCAG8Q86SQ7 713 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-220ENST00000477528 ATP11CQ8NB49 1132 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 KLHL11Q9NVR0 708 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 IGKV6D-41A0A0C4DH26 115 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 AARSP49588 968 aaKnown RBP eCLIP15.49■□□□□ 0.07
HDAC6-220ENST00000477528 PRPSAP1Q14558 356 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 BMT2Q1RMZ1 405 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 MCEEQ96PE7 176 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 RNF181Q9P0P0 153 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 CHN1P15882 459 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 TGFB2P61812 414 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 FEZF2Q8TBJ5 459 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 SPIRE2Q8WWL2 714 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 DHX38Q92620 1227 aaKnown RBP15.49■□□□□ 0.07
HDAC6-220ENST00000477528 HSD17B14Q9BPX1 270 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 PABPC3Q9H361 631 aaKnown RBP15.49■□□□□ 0.07
HDAC6-220ENST00000477528 MLXIPLQ9NP71 852 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 WDR91A4D1P6 747 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 CDH16O75309 829 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 IFRD2Q12894 506 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-220ENST00000477528 MKRN3Q13064 507 aaKnown RBP15.49■□□□□ 0.07
HDAC6-220ENST00000477528 POP1Q99575 1024 aaKnown RBP15.49■□□□□ 0.07
HDAC6-220ENST00000477528 HEY1Q9Y5J3 304 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 GAS2O43903 313 aaKnown RBP15.49■□□□□ 0.07
HDAC6-220ENST00000477528 LRRC14Q15048 493 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 P3H1Q32P28 736 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 LRRC31Q6UY01 552 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 SV2AQ7L0J3 742 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 APTXQ7Z2E3 356 aaKnown RBP15.49■□□□□ 0.07
HDAC6-220ENST00000477528 XPO6Q96QU8 1125 aaKnown RBP15.49■□□□□ 0.07
HDAC6-220ENST00000477528 RBM15Q96T37 977 aaKnown RBP eCLIP15.49■□□□□ 0.07
HDAC6-220ENST00000477528 TUBB6Q9BUF5 446 aa15.49■□□□□ 0.07
HDAC6-220ENST00000477528 PKD1L3Q7Z443 1732 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 IL18RAPO95256 599 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 ROR1Q01973 937 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 PTGISQ16647 500 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 CBWD6Q4V339 395 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 ARSHQ5FYA8 562 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 CBWD3Q5JTY5 395 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 CBWD5Q5RIA9 395 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 NBPF12Q5TAG4 269 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-220ENST00000477528 ATF7IP2Q5U623 682 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 FAM47EQ6ZV65 393 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 SLC47A2Q86VL8 602 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 MSL3Q8N5Y2 521 aaKnown RBP15.48■□□□□ 0.07
HDAC6-220ENST00000477528 TGS1Q96RS0 853 aaKnown RBP15.48■□□□□ 0.07
HDAC6-220ENST00000477528 HAUS2Q9NVX0 235 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 M0R2N6 131 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 VWA5AO00534 786 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 DCTN3O75935 186 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 DRP2Q13474 957 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 SLC29A2Q14542 456 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 Q3C1V9 767 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 NT5DC3Q86UY8 548 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 ACAP3Q96P50 834 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 GDF3Q9NR23 364 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 SENP1Q9P0U3 644 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 GEN1Q17RS7 908 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 METTL23Q86XA0 190 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 ATP8B4Q8TF62 1192 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 KIF12Q96FN5 646 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 BTBD6Q96KE9 485 aa15.48■□□□□ 0.07
HDAC6-220ENST00000477528 BTNL10A8MVZ5 291 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 ADAMTS3O15072 1205 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 TCF7P36402 384 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-220ENST00000477528 CDH6P55285 790 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 BCAR1P56945 870 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 PTENP60484 403 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 HIF1AQ16665 826 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 TBC1D1Q86TI0 1168 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-220ENST00000477528 GCOM2Q9BZD3 368 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-220ENST00000477528 TMBIM4Q9HC24 238 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 MAGEB2O15479 319 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 TBC1D12O60347 775 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 FAM107AO95990 144 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 LONRF1Q17RB8 773 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 HP1BP3Q5SSJ5 553 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-220ENST00000477528 ARHGEF19Q8IW93 802 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 PSTPIP1O43586 416 aa15.47■□□□□ 0.07
HDAC6-220ENST00000477528 FECHP22830 423 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms