RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PALB2Q86YC2 1186 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 TTC17Q96AE7 1141 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 SNF8Q96H20 258 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 RBM41Q96IZ5 413 aaKnown RBP11.7□□□□□ -0.54
COL27A1-204ENST00000477421 PARVAQ9NVD7 372 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 PSD3Q9NYI0 1048 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 PCDHGC5Q9Y5F6 944 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 FRMPD4Q14CM0 1322 aa11.7□□□□□ -0.54
COL27A1-204ENST00000477421 VWA5AO00534 786 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 SYF2O95926 243 aaKnown RBP11.69□□□□□ -0.54
COL27A1-204ENST00000477421 FDX1P10109 184 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 ITGA8P53708 1063 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 PDE1BQ01064 536 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 BYSLQ13895 437 aaKnown RBP11.69□□□□□ -0.54
COL27A1-204ENST00000477421 PCNX4Q63HM2 1172 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 AENQ8WTP8 325 aaKnown RBP11.69□□□□□ -0.54
COL27A1-204ENST00000477421 AGAP1Q9UPQ3 857 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 TCP11X1B4DZS4 312 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 ANXA13P27216 316 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 HNRNPH3P31942 346 aaKnown RBP11.69□□□□□ -0.54
COL27A1-204ENST00000477421 COILP38432 576 aaPredicted RBP11.69□□□□□ -0.54
COL27A1-204ENST00000477421 CLNS1AP54105 237 aaKnown RBP11.69□□□□□ -0.54
COL27A1-204ENST00000477421 CDH6P55285 790 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 UGCGQ16739 394 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 EPM2AIP1Q7L775 607 aaPredicted RBP11.69□□□□□ -0.54
COL27A1-204ENST00000477421 LNX1Q8TBB1 728 aaPredicted RBP11.69□□□□□ -0.54
COL27A1-204ENST00000477421 PARD3BQ8TEW8 1205 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 TRAPPC12Q8WVT3 735 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 VAV3Q9UKW4 847 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 A0A0G2JND7 137 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 CALB1P05937 261 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 C4orf19Q8IY42 314 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 UBA3Q8TBC4 463 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 ACTRT1Q8TDG2 376 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 FAF2Q96CS3 445 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 MMP19Q99542 508 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 SNX25Q9H3E2 840 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 SLC38A10Q9HBR0 1119 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 GPBP1L1Q9HC44 474 aaPredicted RBP11.69□□□□□ -0.54
COL27A1-204ENST00000477421 FAM49BQ9NUQ9 324 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 IP6K2Q9UHH9 426 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 M0QZ92 97 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 PLSCR1O15162 318 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 MEFVO15553 781 aaPredicted RBP11.69□□□□□ -0.54
COL27A1-204ENST00000477421 SLC26A4O43511 780 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 OATP04181 439 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 MYO1EQ12965 1108 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 ACAD10Q6JQN1 1059 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 LLGL2Q6P1M3 1020 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 CCDC33Q8N5R6 958 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 RSRC1Q96IZ7 334 aaKnown RBP11.69□□□□□ -0.54
COL27A1-204ENST00000477421 FAM167AQ96KS9 214 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 INTUQ9ULD6 942 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 SNX9Q9Y5X1 595 aa11.69□□□□□ -0.54
COL27A1-204ENST00000477421 GTPBP10A4D1E9 387 aaKnown RBP11.68□□□□□ -0.54
COL27A1-204ENST00000477421 C19orf81C9J6K1 198 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 ADRB2P07550 413 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 ITGB3BPQ13352 177 aaPredicted RBP11.68□□□□□ -0.54
COL27A1-204ENST00000477421 SNCBQ16143 134 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 FAM83AQ86UY5 434 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 PPP1R13LQ8WUF5 828 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 HVCN1Q96D96 273 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 KIF12Q96FN5 646 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 RNF19AQ9NV58 838 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 WDR70Q9NW82 654 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 PARP4Q9UKK3 1724 aaKnown RBP11.68□□□□□ -0.54
COL27A1-204ENST00000477421 EXTL3O43909 919 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 CPP00450 1065 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 CYP3A4P08684 503 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 PHKA2P46019 1235 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 TTLL4Q14679 1199 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 RRP1BQ14684 758 aaKnown RBP11.68□□□□□ -0.54
COL27A1-204ENST00000477421 ZCWPW2Q504Y3 356 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 ARMC9Q7Z3E5 817 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 CCDC60Q8IWA6 550 aaPredicted RBP11.68□□□□□ -0.54
COL27A1-204ENST00000477421 PPM1NQ8N819 430 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 SREK1Q8WXA9 508 aaKnown RBP11.68□□□□□ -0.54
COL27A1-204ENST00000477421 RANBP17Q9H2T7 1088 aaKnown RBP11.68□□□□□ -0.54
COL27A1-204ENST00000477421 SMYD2Q9NRG4 433 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 RASSF10A6NK89 507 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 MYCP01106 439 aaPredicted RBP11.68□□□□□ -0.54
COL27A1-204ENST00000477421 ADORA2BP29275 332 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 NLRP11P59045 1033 aaKnown RBP11.68□□□□□ -0.54
COL27A1-204ENST00000477421 CYP24A1Q07973 514 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 PTGISQ16647 500 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 LY6KQ17RY6 165 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 CCDC14Q49A88 953 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 EMC1Q8N766 993 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 DNAAF3Q8N9W5 541 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 GPRASP2Q96D09 838 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 TGS1Q96RS0 853 aaKnown RBP11.68□□□□□ -0.54
COL27A1-204ENST00000477421 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 LRRC4Q9HBW1 653 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 A1CFQ9NQ94 594 aaKnown RBP11.68□□□□□ -0.54
COL27A1-204ENST00000477421 RIPK3Q9Y572 518 aa11.68□□□□□ -0.54
COL27A1-204ENST00000477421 IGKV6D-41A0A0C4DH26 115 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 PDGFRBP09619 1106 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 CUL2Q13617 745 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 SURF1Q15526 300 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms