RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 CACNB1Q02641 598 aaPredicted RBP16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 ZC3H12AQ5D1E8 599 aaKnown RBP16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 AADACL2Q6P093 401 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 FAM47EQ6ZV65 393 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 SLFN12Q8IYM2 578 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 ZDHHC14Q8IZN3 488 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 KCTD17Q8N5Z5 321 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 TTC8Q8TAM2 541 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 PTPRN2Q92932 1015 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 CSRNP1Q96S65 589 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 PAIP2Q9BPZ3 127 aaKnown RBP16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 GPR88Q9GZN0 384 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 GLT8D2Q9H1C3 349 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 MMADHCQ9H3L0 296 aaPredicted RBP16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 PPCSQ9HAB8 311 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 PTPN22Q9Y2R2 807 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 PLIN4Q96Q06 1357 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 COL2A1P02458 1487 aaPredicted RBP16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 A0A1W2PRG0 241 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 H0Y3Z8 333 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 C2CD2LO14523 706 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 CREB3O43889 395 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 ATP9AO75110 1047 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 AKR1B1P15121 316 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 GAP43P17677 238 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 COMTP21964 271 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 CACNA2D1P54289 1103 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 RNF220Q5VTB9 566 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 FKBP1CQ5VVH2 108 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 SNX30Q5VWJ9 437 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 FYB2Q5VWT5 728 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 LRRC74BQ6ZQY2 392 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 SH3BP5LQ7L8J4 393 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 SYT2Q8N9I0 419 aaPredicted RBP16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 SMC1BQ8NDV3 1235 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 NCSTNQ92542 709 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 AZIN2Q96A70 460 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 INTS2Q9H0H0 1204 aaKnown RBP16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 SEPT11Q9NVA2 429 aaKnown RBP16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 CHCHD3Q9NX63 227 aaKnown RBP16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 IL1RAPL1Q9NZN1 696 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 ZNF212Q9UDV6 495 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 ZFP69BQ9UJL9 534 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 NAALADL1Q9UQQ1 740 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 SIPA1L1O43166 1804 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 ZMYM2Q9UBW7 1377 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 RASA4BC9J798 803 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 WNT10BO00744 389 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 RASA4O43374 803 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 CCDC22O60826 627 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 MARCKSL1P49006 195 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 WDR4P57081 412 aaKnown RBP16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 SLC34A1Q06495 639 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 AP1B1Q10567 949 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 CERKLQ49MI3 558 aaPredicted RBP16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 MOXD1Q6UVY6 613 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 TDRPQ86YL5 185 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 FAM151AQ8WW52 585 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 DNAJC18Q9H819 358 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 VAT1LQ9HCJ6 419 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 OLFML3Q9NRN5 406 aa16.21■□□□□ 0.19
CLSTN1-205ENST00000477264 FSCN2O14926 492 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 HGSO14964 777 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 TP73O15350 636 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 PENKP01210 267 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 PYGMP11217 842 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 BCRP11274 1271 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 ATF2P15336 505 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 CASP4P49662 377 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 GMPSP49915 693 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 DAB2IPQ5VWQ8 1189 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 ZNF449Q6P9G9 518 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 GATA6Q92908 595 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 REEP2Q9BRK0 252 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 MTMR4Q9NYA4 1195 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 DICER1Q9UPY3 1922 aaKnown RBP16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 RBBP6Q7Z6E9 1792 aaKnown RBP16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 LOXHD1Q8IVV2 1947 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 MAP3K7O43318 606 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 TBCAO75347 108 aaKnown RBP16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 ENTPD5O75356 428 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 CHKAP35790 457 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 ZNF280AP59817 542 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 RCN1Q15293 331 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 SGO2Q562F6 1265 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 RBM26Q5T8P6 1007 aaKnown RBP16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 ZC3H18Q86VM9 953 aaKnown RBP16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 MICALL2Q8IY33 904 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 DENND1AQ8TEH3 1009 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 UCMAQ8WVF2 138 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 COA7Q96BR5 231 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 SYNCQ9H7C4 482 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 ZWILCHQ9H900 591 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 TAS2R14Q9NYV8 317 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 STX18Q9P2W9 335 aaKnown RBP16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 DNM3Q9UQ16 869 aa16.2■□□□□ 0.18
CLSTN1-205ENST00000477264 PNMA6FA0A0J9YX94 578 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 FAM196BA6NMK8 535 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 UPP2O95045 317 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms