RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 NOP14P78316 857 aaKnown RBP12.3□□□□□ -0.44
NUP188-205ENST00000477069 DHX34Q14147 1143 aaKnown RBP12.3□□□□□ -0.44
NUP188-205ENST00000477069 KCTD19Q17RG1 926 aaPredicted RBP12.3□□□□□ -0.44
NUP188-205ENST00000477069 DUPD1Q68J44 220 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 EXOC8Q8IYI6 725 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 LRRC71Q8N4P6 559 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 GLG1Q92896 1179 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 SPATA33Q96N06 139 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 TRIM51Q9BSJ1 452 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 SYT17Q9BSW7 474 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 CPSF3Q9UKF6 684 aaKnown RBP12.3□□□□□ -0.44
NUP188-205ENST00000477069 GOLGA6L10A0A0M3HER8 536 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 GOLGA6CA6NDK9 693 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 H0YGN5 161 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 RPS6KA5O75582 802 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 GOLGA6DP0CG33 693 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 TBXAS1P24557 533 aaPredicted RBP12.3□□□□□ -0.44
NUP188-205ENST00000477069 FLT3P36888 993 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 SLC26A2P50443 739 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 AP3M2P53677 418 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 DR1Q01658 176 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 PPFIA1Q13136 1202 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 NCOA4Q13772 614 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
NUP188-205ENST00000477069 CFAP58Q5T655 872 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 C1orf131Q8NDD1 294 aaKnown RBP12.3□□□□□ -0.44
NUP188-205ENST00000477069 TXLNGYQ9BZA5 131 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 FAM114A2Q9NRY5 505 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 GOLGA6AQ9NYA3 693 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 PCYOX1Q9UHG3 505 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 NFS1Q9Y697 457 aa12.3□□□□□ -0.44
NUP188-205ENST00000477069 FAM187AA6NFU0 413 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 NOP56O00567 594 aaKnown RBP12.29□□□□□ -0.44
NUP188-205ENST00000477069 ASS1P00966 412 aaKnown RBP12.29□□□□□ -0.44
NUP188-205ENST00000477069 PRKCBP05771 671 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 HSD17B3P37058 310 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 NOMO3P69849 1222 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 PTP4A2Q12974 167 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 TTC27Q6P3X3 843 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 TSHZ1Q6ZSZ6 1077 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 ADAT2Q7Z6V5 191 aaKnown RBP12.29□□□□□ -0.44
NUP188-205ENST00000477069 DHX37Q8IY37 1157 aaKnown RBP12.29□□□□□ -0.44
NUP188-205ENST00000477069 RNF149Q8NC42 400 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 CPA5Q8WXQ8 436 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 CYFIP2Q96F07 1278 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 TRIM11Q96F44 468 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 C2orf40Q9H1Z8 148 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 FZD8Q9H461 694 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 PDGFCQ9NRA1 345 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 ZDHHC18Q9NUE0 388 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 UTP11Q9Y3A2 253 aaKnown RBP12.29□□□□□ -0.44
NUP188-205ENST00000477069 OGTO15294 1046 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 KRT14P02533 472 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 RRM1P23921 792 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 CHRNA3P32297 505 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 HLTFQ14527 1009 aaKnown RBP eCLIP12.29□□□□□ -0.44
NUP188-205ENST00000477069 TRIM72Q6ZMU5 477 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 SLC13A5Q86YT5 568 aaPredicted RBP12.29□□□□□ -0.44
NUP188-205ENST00000477069 EFCAB13Q8IY85 973 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 ABRAQ8N0Z2 381 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 C12orf50Q8NA57 414 aaPredicted RBP12.29□□□□□ -0.44
NUP188-205ENST00000477069 ERP44Q9BS26 406 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 TRIM7Q9C029 511 aa12.29□□□□□ -0.44
NUP188-205ENST00000477069 EVPLQ92817 2033 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 TCRBV7S2A1N4TA0A589 114 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 SPOPO43791 374 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 CST3P01034 146 aaPredicted RBP12.28□□□□□ -0.44
NUP188-205ENST00000477069 SRGAP2CP0DJJ0 459 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 ACTN2P35609 894 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 DRG2P55039 364 aaKnown RBP12.28□□□□□ -0.44
NUP188-205ENST00000477069 MAPK6Q16659 721 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 SEL1L2Q5TEA6 688 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 TMEM270Q6UE05 265 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 MAMDC4Q6UXC1 1216 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 LRIG3Q6UXM1 1119 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 ARMC9Q7Z3E5 817 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 ZBTB33Q86T24 672 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 PHF13Q86YI8 300 aaPredicted RBP12.28□□□□□ -0.44
NUP188-205ENST00000477069 JAMLQ86YT9 394 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 ZBTB8OSQ8IWT0 167 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 RBBP8NLQ8NC74 664 aaPredicted RBP12.28□□□□□ -0.44
NUP188-205ENST00000477069 FAM76AQ8TAV0 307 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 TRAPPC12Q8WVT3 735 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 C18orf8Q96DM3 657 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 RAB17Q9H0T7 212 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 SMARCAD1Q9H4L7 1026 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 PCDHB4Q9Y5E5 795 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 HOXC6P09630 235 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 TXNP10599 105 aaKnown RBP12.28□□□□□ -0.44
NUP188-205ENST00000477069 HARSP12081 509 aaKnown RBP12.28□□□□□ -0.44
NUP188-205ENST00000477069 CAPN2P17655 700 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 GNA15P30679 374 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 ARHGAP1Q07960 439 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 ZNF792Q3KQV3 632 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 LLGL2Q6P1M3 1020 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 TMC3Q7Z5M5 1100 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 NFKBIZQ9BYH8 718 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 EFCC1Q9HA90 598 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 ANAPC7Q9UJX3 599 aa12.28□□□□□ -0.44
NUP188-205ENST00000477069 ACKR2O00590 384 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms