RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TRIM31Q9BZY9 425 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 ACP6Q9NPH0 428 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 AVENQ9NQS1 362 aaPredicted RBP17.6■□□□□ 0.41
TMEM53-208ENST00000476724 CNOT8Q9UFF9 292 aaKnown RBP17.6■□□□□ 0.41
TMEM53-208ENST00000476724 PCDHB2Q9Y5E7 798 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 MAFBQ9Y5Q3 323 aaPredicted RBP17.6■□□□□ 0.41
TMEM53-208ENST00000476724 NDUFAB1O14561 156 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 LDHAP00338 332 aaKnown RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 PIGRP01833 764 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 PYGMP11217 842 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 KRT5P13647 590 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 IRX5P78411 483 aaPredicted RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 EMC2Q15006 297 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 TTC19Q6DKK2 380 aaPredicted RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 CCDC137Q6PK04 289 aaKnown RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 CROCCP2Q86T23 111 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 SHCBP1Q8NEM2 672 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 OR2W6PQ8NHA6 318 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 PSPC1Q8WXF1 523 aaKnown RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 RASSF4Q9H2L5 321 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 CENPHQ9H3R5 247 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 MTRF1LQ9UGC7 380 aaKnown RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 FEZ2Q9UHY8 353 aaPredicted RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 SLC45A1Q9Y2W3 748 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 ATMINO43313 823 aaPredicted RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 FARP2O94887 1054 aaPredicted RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 UNGP13051 313 aaPredicted RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 MARCKSL1P49006 195 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 FNTAP49354 379 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 POLGP54098 1239 aaPredicted RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 LY6KQ17RY6 165 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 ZACNQ401N2 412 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 MTERF2Q49AM1 385 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 AADACL2Q6P093 401 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 C12orf50Q8NA57 414 aaPredicted RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 C18orf8Q96DM3 657 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 PABPC3Q9H361 631 aaKnown RBP17.59■□□□□ 0.41
TMEM53-208ENST00000476724 ATP8A1Q9Y2Q0 1164 aa17.59■□□□□ 0.41
TMEM53-208ENST00000476724 NUDT17P0C025 328 aa17.58■□□□□ 0.4
TMEM53-208ENST00000476724 ATP4AP20648 1035 aa17.58■□□□□ 0.4
TMEM53-208ENST00000476724 COILP38432 576 aaPredicted RBP17.58■□□□□ 0.4
TMEM53-208ENST00000476724 SLC1A1P43005 524 aa17.58■□□□□ 0.4
TMEM53-208ENST00000476724 NAMPTP43490 491 aa17.58■□□□□ 0.4
TMEM53-208ENST00000476724 PMS2P54278 862 aa17.58■□□□□ 0.4
TMEM53-208ENST00000476724 GUCY1A3Q02108 690 aa17.58■□□□□ 0.4
TMEM53-208ENST00000476724 PTGISQ16647 500 aa17.58■□□□□ 0.4
TMEM53-208ENST00000476724 HOOK3Q86VS8 718 aa17.58■□□□□ 0.4
TMEM53-208ENST00000476724 MAIP1Q8WWC4 291 aa17.58■□□□□ 0.4
TMEM53-208ENST00000476724 DHX33Q9H6R0 707 aaKnown RBP17.58■□□□□ 0.4
TMEM53-208ENST00000476724 ZNF302Q9NR11 478 aa17.58■□□□□ 0.4
TMEM53-208ENST00000476724 AGO2Q9UKV8 859 aaKnown RBP17.58■□□□□ 0.4
TMEM53-208ENST00000476724 SNX24Q9Y343 169 aa17.58■□□□□ 0.4
TMEM53-208ENST00000476724 FAM170AA1A519 330 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 C4BPAP04003 597 aaKnown RBP17.57■□□□□ 0.4
TMEM53-208ENST00000476724 MAGEA9P43362 315 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 CDR1P51861 262 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 PLTPP55058 493 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 HUNKP57058 714 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 IFFO1Q0D2I5 559 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 TMEM63BQ5T3F8 832 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 PPP1R2P3Q6NXS1 205 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 FBXO16Q8IX29 292 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-208ENST00000476724 C10orf67Q8IYJ2 551 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 MCOLN2Q8IZK6 566 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 ZNF516Q92618 1163 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 NIFKQ9BYG3 293 aaKnown RBP17.57■□□□□ 0.4
TMEM53-208ENST00000476724 LRRC19Q9H756 370 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 CHORDC1Q9UHD1 332 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-208ENST00000476724 GSTTP1A0A1W2PQM5 241 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 FSCN2O14926 492 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 OATP04181 439 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 TNNI1P19237 187 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 MAPK4P31152 587 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 PPP2R2AP63151 447 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 KRT71Q3SY84 523 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 ODF2Q5BJF6 829 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 ZDHHC24Q6UX98 284 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 TRIM72Q6ZMU5 477 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 CCDC105Q8IYK2 499 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 C3orf20Q8ND61 904 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 DEPTORQ8TB45 409 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 GTF3C2Q8WUA4 911 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-208ENST00000476724 SLCO2A1Q92959 643 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 PCYT2Q99447 389 aa17.57■□□□□ 0.4
TMEM53-208ENST00000476724 K7ERI5 159 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 HPDP32754 393 aaPredicted RBP17.56■□□□□ 0.4
TMEM53-208ENST00000476724 SLMAPQ14BN4 828 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 CHADLQ6NUI6 762 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 ZDHHC14Q8IZN3 488 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 PI4K2AQ9BTU6 479 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 GRHL1Q9NZI5 618 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 BCCIPQ9P287 314 aaKnown RBP eCLIP17.56■□□□□ 0.4
TMEM53-208ENST00000476724 MORF4L1Q9UBU8 362 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 PASKQ96RG2 1323 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 ATXN2Q99700 1313 aaKnown RBP17.56■□□□□ 0.4
TMEM53-208ENST00000476724 HLA-DRAP01903 254 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 RARAP10276 462 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 ARL2P36404 184 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 RFC5P40937 340 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms