RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PPM1LQ5SGD2 360 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 AXDND1Q5T1B0 1012 aaPredicted RBP11.78□□□□□ -0.52
SEC13-214ENST00000476597 LIN9Q5TKA1 542 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 SLC8B1Q6J4K2 584 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 RTL10Q7L3V2 364 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 SLC44A3Q8N4M1 653 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 PRSS33Q8NF86 280 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 NXPE3Q969Y0 559 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 BICD1Q96G01 975 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 CLIC6Q96NY7 704 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 CCDC39Q9UFE4 941 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 MORC2Q9Y6X9 1032 aaPredicted RBP11.78□□□□□ -0.52
SEC13-214ENST00000476597 CACNA1HO95180 2353 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 WDR87Q6ZQQ6 2873 aa11.77□□□□□ -0.52
SEC13-214ENST00000476597 A0A0B4J269 797 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 LACTBL1A8MY62 500 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 K7ENM7 598 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 FAM189A1O60320 539 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 ABLIM3O94929 683 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 CXCL8P10145 99 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 CYP3A5P20815 502 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 FSHRP23945 695 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 NMT1P30419 496 aaKnown RBP11.77□□□□□ -0.53
SEC13-214ENST00000476597 LRPAP1P30533 357 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 ABCD1P33897 745 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 TNFSF9P41273 254 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 LIG4P49917 911 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 NUBP1P53384 320 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 CEBPZQ03701 1054 aaKnown RBP11.77□□□□□ -0.53
SEC13-214ENST00000476597 SLC39A14Q15043 492 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 VARS2Q5ST30 1063 aaKnown RBP11.77□□□□□ -0.53
SEC13-214ENST00000476597 GRASPQ7Z6J2 395 aaPredicted RBP11.77□□□□□ -0.53
SEC13-214ENST00000476597 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.53
SEC13-214ENST00000476597 ZNF461Q8TAF7 563 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 SLC7A14Q8TBB6 771 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 RSAD2Q8WXG1 361 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 SUSD3Q96L08 255 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 ST6GALNAC4Q9H4F1 302 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 ZSCAN16Q9H4T2 348 aaPredicted RBP11.77□□□□□ -0.53
SEC13-214ENST00000476597 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 DUSP12Q9UNI6 340 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 NUB1Q9Y5A7 615 aa11.77□□□□□ -0.53
SEC13-214ENST00000476597 ZFP37Q9Y6Q3 630 aaPredicted RBP11.77□□□□□ -0.53
SEC13-214ENST00000476597 ZFHX2Q9C0A1 2572 aaPredicted RBP11.76□□□□□ -0.53
SEC13-214ENST00000476597 TDRD15B5MCY1 1934 aaKnown RBP11.76□□□□□ -0.53
SEC13-214ENST00000476597 ANHXE9PGG2 379 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 H7C4K7 107 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 HNRNPDLO14979 420 aaKnown RBP11.76□□□□□ -0.53
SEC13-214ENST00000476597 OGTO15294 1046 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 CCL16O15467 120 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 STX6O43752 255 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 XYLBO75191 536 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 TBCAO75347 108 aaKnown RBP11.76□□□□□ -0.53
SEC13-214ENST00000476597 PTPN5P54829 565 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 NTHL1P78549 312 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 ROR1Q01973 937 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 SPAG1Q07617 926 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 TCF15Q12870 199 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 ENOX2Q16206 610 aaKnown RBP11.76□□□□□ -0.53
SEC13-214ENST00000476597 RRAGBQ5VZM2 374 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 SLC39A4Q6P5W5 647 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 GET4Q7L5D6 327 aaPredicted RBP11.76□□□□□ -0.53
SEC13-214ENST00000476597 ZNF720Q7Z2F6 126 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 MAP4K3Q8IVH8 894 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 CD302Q8IX05 232 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 SNX21Q969T3 373 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 KIF12Q96FN5 646 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 USP28Q96RU2 1077 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 TSPAN18Q96SJ8 248 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 ZHX3Q9H4I2 956 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 RPF1Q9H9Y2 349 aaKnown RBP11.76□□□□□ -0.53
SEC13-214ENST00000476597 DNMT3BQ9UBC3 853 aaKnown RBP11.76□□□□□ -0.53
SEC13-214ENST00000476597 STK17AQ9UEE5 414 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 TUBGCP4Q9UGJ1 667 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 UBQLN1Q9UMX0 589 aaKnown RBP11.76□□□□□ -0.53
SEC13-214ENST00000476597 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.76□□□□□ -0.53
SEC13-214ENST00000476597 STYXL1Q9Y6J8 313 aa11.76□□□□□ -0.53
SEC13-214ENST00000476597 WDR27A2RRH5 827 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 MYMKA6NI61 221 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 ANKRD63C9JTQ0 380 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 M0QZQ0 153 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 NARSO43776 548 aaKnown RBP11.75□□□□□ -0.53
SEC13-214ENST00000476597 ATF2P15336 505 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 NPR3P17342 541 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 CLCN5P51795 746 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 PPP2R3AQ06190 1150 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 ZC2HC1CQ53FD0 456 aaPredicted RBP11.75□□□□□ -0.53
SEC13-214ENST00000476597 ZBTB41Q5SVQ8 909 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 ASTLQ6HA08 431 aaPredicted RBP11.75□□□□□ -0.53
SEC13-214ENST00000476597 SV2BQ7L1I2 683 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 DYMQ7RTS9 669 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 TCEAL8Q8IYN2 117 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 TMEM130Q8N3G9 435 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 TMEM105Q8N8V8 129 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 APPL2Q8NEU8 664 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 DDX12PQ92771 950 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 DNAJC19Q96DA6 116 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 MSTO1Q9BUK6 570 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 STRA6Q9BX79 667 aa11.75□□□□□ -0.53
SEC13-214ENST00000476597 WNT16Q9UBV4 365 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms