RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 SMIM28A0A1B0GU29 152 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 HNRNPDLO14979 420 aaKnown RBP17.68■□□□□ 0.42
COL1A1-205ENST00000476387 CLDN3O15551 220 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 CUTAO60888 179 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 B3GAT3O94766 335 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 HNRNPA1P09651 372 aaKnown RBP eCLIP17.68■□□□□ 0.42
COL1A1-205ENST00000476387 MYBP10242 640 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 FGFR3P22607 806 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 HOXA9P31269 272 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 GBP2P32456 591 aaPredicted RBP17.68■□□□□ 0.42
COL1A1-205ENST00000476387 LIG4P49917 911 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 PKP1Q13835 747 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 UPP1Q16831 310 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 GLRA4Q5JXX5 417 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 ALKAL1Q6UXT8 129 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 DYMQ7RTS9 669 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 PDILTQ8N807 584 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 ACAP3Q96P50 834 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 PANK2Q9BZ23 570 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 SLC38A7Q9NVC3 462 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 CFAP45Q9UL16 551 aa17.68■□□□□ 0.42
COL1A1-205ENST00000476387 DOCK8Q8NF50 2099 aa17.67■□□□□ 0.42
COL1A1-205ENST00000476387 ABLIM1O14639 778 aa17.67■□□□□ 0.42
COL1A1-205ENST00000476387 TRAPPC3O43617 180 aa17.67■□□□□ 0.42
COL1A1-205ENST00000476387 CLCN5P51795 746 aa17.67■□□□□ 0.42
COL1A1-205ENST00000476387 CLCNKBP51801 687 aa17.67■□□□□ 0.42
COL1A1-205ENST00000476387 BECN1Q14457 450 aa17.67■□□□□ 0.42
COL1A1-205ENST00000476387 LIN9Q5TKA1 542 aa17.67■□□□□ 0.42
COL1A1-205ENST00000476387 ASTLQ6HA08 431 aaPredicted RBP17.67■□□□□ 0.42
COL1A1-205ENST00000476387 DDX12PQ92771 950 aa17.67■□□□□ 0.42
COL1A1-205ENST00000476387 KCNN1Q92952 543 aa17.67■□□□□ 0.42
COL1A1-205ENST00000476387 DDX27Q96GQ7 796 aaKnown RBP17.67■□□□□ 0.42
COL1A1-205ENST00000476387 ZBTB45Q96K62 511 aaPredicted RBP17.67■□□□□ 0.42
COL1A1-205ENST00000476387 MFSD1Q9H3U5 465 aa17.67■□□□□ 0.42
COL1A1-205ENST00000476387 SEL1LQ9UBV2 794 aa17.67■□□□□ 0.42
COL1A1-205ENST00000476387 TBX20Q9UMR3 447 aa17.67■□□□□ 0.42
COL1A1-205ENST00000476387 VWA8A3KMH1 1905 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 MYMKA6NI61 221 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 GALR2O43603 387 aaPredicted RBP17.66■□□□□ 0.42
COL1A1-205ENST00000476387 POU2F2P09086 479 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 KCNE1P15382 129 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 GAP43P17677 238 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 NMT1P30419 496 aaKnown RBP17.66■□□□□ 0.42
COL1A1-205ENST00000476387 ME1P48163 572 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 RAB33AQ14088 237 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 CD300LGQ6UXG3 332 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 RTL10Q7L3V2 364 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 SFR1Q86XK3 245 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 SNX27Q96L92 541 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 MYADMQ96S97 322 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 MTRRQ9UBK8 725 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 BACE2Q9Y5Z0 518 aa17.66■□□□□ 0.42
COL1A1-205ENST00000476387 ZFP37Q9Y6Q3 630 aaPredicted RBP17.66■□□□□ 0.42
COL1A1-205ENST00000476387 A0A087X0B3 334 aa17.65■□□□□ 0.42
COL1A1-205ENST00000476387 IDEP14735 1019 aa17.65■□□□□ 0.42
COL1A1-205ENST00000476387 DNM1Q05193 864 aaKnown RBP17.65■□□□□ 0.42
COL1A1-205ENST00000476387 MCL1Q07820 350 aa17.65■□□□□ 0.42
COL1A1-205ENST00000476387 UVSSAQ2YD98 709 aa17.65■□□□□ 0.42
COL1A1-205ENST00000476387 PPM1LQ5SGD2 360 aa17.65■□□□□ 0.42
COL1A1-205ENST00000476387 ANKS3Q6ZW76 656 aa17.65■□□□□ 0.42
COL1A1-205ENST00000476387 MAP4K3Q8IVH8 894 aa17.65■□□□□ 0.42
COL1A1-205ENST00000476387 TMEM105Q8N8V8 129 aa17.65■□□□□ 0.42
COL1A1-205ENST00000476387 CNTN3Q9P232 1028 aa17.65■□□□□ 0.42
COL1A1-205ENST00000476387 ANK1P16157 1881 aa17.65■□□□□ 0.42
COL1A1-205ENST00000476387 ADAM12O43184 909 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 XYLBO75191 536 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 PIGRP01833 764 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 C8AP07357 584 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 LAMP2P13473 410 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 OR1D2P34982 312 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 GTF2BQ00403 316 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 SOX4Q06945 474 aaPredicted RBP17.64■□□□□ 0.41
COL1A1-205ENST00000476387 KYAT1Q16773 422 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 HVCN1Q96D96 273 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 FIZ1Q96SL8 496 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 LRRC27Q9C0I9 530 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 TNMDQ9H2S6 317 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 CUEDC2Q9H467 287 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 ST6GALNAC4Q9H4F1 302 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 MRPL44Q9H9J2 332 aaKnown RBP17.64■□□□□ 0.41
COL1A1-205ENST00000476387 GOLGA2P5Q9HBQ8 144 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 WNT16Q9UBV4 365 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 FBXL21Q9UKT6 434 aa17.64■□□□□ 0.41
COL1A1-205ENST00000476387 ANHXE9PGG2 379 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 PODXLO00592 558 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 CLTAP09496 248 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 FSHRP23945 695 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 IGFBP6P24592 240 aaPredicted RBP17.63■□□□□ 0.41
COL1A1-205ENST00000476387 TKTP29401 623 aaKnown RBP17.63■□□□□ 0.41
COL1A1-205ENST00000476387 RPL9P32969 192 aaKnown RBP17.63■□□□□ 0.41
COL1A1-205ENST00000476387 SEZ6Q53EL9 994 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 SHC4Q6S5L8 630 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 GET4Q7L5D6 327 aaPredicted RBP17.63■□□□□ 0.41
COL1A1-205ENST00000476387 SLC44A3Q8N4M1 653 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 IQUBQ8NA54 791 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 C3orf58Q8NDZ4 430 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 RSAD2Q8WXG1 361 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 DHX58Q96C10 678 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 DNAJC19Q96DA6 116 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 ZMAT2Q96NC0 199 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms