RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MTF2Q9Y483 593 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-207ENST00000475549 ARID2Q68CP9 1835 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 FRYLO94915 3013 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 WDR27A2RRH5 827 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 ST18O60284 1047 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 GFRA3O60609 400 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 LRRN2O75325 713 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 VNN2O95498 520 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 DCNP07585 359 aaKnown RBP7.68□□□□□ -1.18
HDAC3-207ENST00000475549 POU2F2P09086 479 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 HARSP12081 509 aaKnown RBP7.68□□□□□ -1.18
HDAC3-207ENST00000475549 ATF2P15336 505 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 TNFSF9P41273 254 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 CCR2P41597 374 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 YARSP54577 528 aaKnown RBP7.68□□□□□ -1.18
HDAC3-207ENST00000475549 NCKAP1LP55160 1127 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 ROR1Q01973 937 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 MCL1Q07820 350 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 ANGPT1Q15389 498 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 LIN9Q5TKA1 542 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 LARP1BQ659C4 914 aaKnown RBP7.68□□□□□ -1.18
HDAC3-207ENST00000475549 ARL6IP4Q66PJ3 421 aaKnown RBP7.68□□□□□ -1.18
HDAC3-207ENST00000475549 PDXDC1Q6P996 788 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 ZPBP2Q6X784 338 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 ANKS3Q6ZW76 656 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 USP49Q70CQ1 688 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 NPAS3Q8IXF0 933 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 KCNN1Q92952 543 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 REEP2Q9BRK0 252 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 TIPINQ9BVW5 301 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 CCDC94Q9BW85 323 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-207ENST00000475549 PLA2G2FQ9BZM2 168 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 IRF2BPLQ9H1B7 796 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 TBC1D17Q9HA65 648 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 TOPORSQ9NS56 1045 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-207ENST00000475549 SLC38A7Q9NVC3 462 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 ANKFY1Q9P2R3 1169 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 TUBGCP4Q9UGJ1 667 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 FBXL5Q9UKA1 691 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 ZFP37Q9Y6Q3 630 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-207ENST00000475549 KMT2EQ8IZD2 1858 aa7.68□□□□□ -1.18
HDAC3-207ENST00000475549 DCHS1Q96JQ0 3298 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 TTC26A0AVF1 554 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 ARHGEF37A1IGU5 675 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 PRR23AA6NEV1 266 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 LACTBL1A8MY62 500 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 PPEF2O14830 753 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 SYN3O14994 580 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 TRAPPC3O43617 180 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 XYLBO75191 536 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 ADRB2P07550 413 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 RHOP08100 348 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 CXCL8P10145 99 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 RPL9P32969 192 aaKnown RBP7.67□□□□□ -1.18
HDAC3-207ENST00000475549 GUCY2FP51841 1108 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 ZNF131P52739 623 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 ARPP19P56211 112 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 STARD6P59095 220 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 FZD5Q13467 585 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 SNW1Q13573 536 aaKnown RBP7.67□□□□□ -1.18
HDAC3-207ENST00000475549 KARSQ15046 597 aaKnown RBP7.67□□□□□ -1.18
HDAC3-207ENST00000475549 PABPC1LQ4VXU2 614 aaKnown RBP7.67□□□□□ -1.18
HDAC3-207ENST00000475549 PRSS36Q5K4E3 855 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 SPECC1Q5M775 1068 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 PHLDB3Q6NSJ2 640 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 SLC39A4Q6P5W5 647 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 RTL10Q7L3V2 364 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 HAUS6Q7Z4H7 955 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 TCEAL8Q8IYN2 117 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 MAML2Q8IZL2 1156 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-207ENST00000475549 KCTD17Q8N5Z5 321 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 ING5Q8WYH8 240 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 DDX12PQ92771 950 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 TCEAL4Q96EI5 215 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 MCRS1Q96EZ8 462 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 SUSD3Q96L08 255 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 ZSWIM3Q96MP5 696 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 TBC1D32Q96NH3 1257 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 KXD1Q9BQD3 176 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 RTP3Q9BQQ7 232 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 DDX23Q9BUQ8 820 aaKnown RBP7.67□□□□□ -1.18
HDAC3-207ENST00000475549 FOXQ1Q9C009 403 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 IKZF4Q9H2S9 585 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 CRISPLD1Q9H336 500 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 ARHGEF3Q9NR81 526 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 KCND2Q9NZV8 630 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 CEP72Q9P209 647 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 DAXXQ9UER7 740 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-207ENST00000475549 KCNH3Q9ULD8 1083 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 TBX20Q9UMR3 447 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 TIMM13Q9Y5L4 95 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-207ENST00000475549 MYO10Q9HD67 2058 aa7.67□□□□□ -1.18
HDAC3-207ENST00000475549 A0A0B4J269 797 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 TISP43B9A030 160 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 H3BQV1 296 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 M0QZQ0 153 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 STK25O00506 426 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 SPTLC1O15269 473 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 CLDN3O15551 220 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 MOSPD3O75425 235 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms