RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 GCSHP23434 173 aa6.18□□□□□ -1.42
LTN1-204ENST00000475344 ATP2B3Q16720 1220 aa6.18□□□□□ -1.42
LTN1-204ENST00000475344 FITM2Q8N6M3 262 aa6.18□□□□□ -1.42
LTN1-204ENST00000475344 TBC1D15Q8TC07 691 aa6.18□□□□□ -1.42
LTN1-204ENST00000475344 MARS2Q96GW9 593 aaKnown RBP6.18□□□□□ -1.42
LTN1-204ENST00000475344 TDP1Q9NUW8 608 aa6.18□□□□□ -1.42
LTN1-204ENST00000475344 TUBD1Q9UJT1 453 aa6.18□□□□□ -1.42
LTN1-204ENST00000475344 KIAA0355O15063 1070 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 CKBP12277 381 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 C5AR1P21730 350 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 SLC16A1P53985 500 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 NOMO3P69849 1222 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 CXADRP78310 365 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 NOMO2Q5JPE7 1267 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 SYDE2Q5VT97 1194 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 ARMC6Q6NXE6 501 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 GPR149Q86SP6 731 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 CBARPQ8N350 705 aaPredicted RBP6.17□□□□□ -1.42
LTN1-204ENST00000475344 FAXDC2Q96IV6 333 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 CCDC8Q9H0W5 538 aaPredicted RBP6.17□□□□□ -1.42
LTN1-204ENST00000475344 C11orf54Q9H0W9 315 aaPredicted RBP6.17□□□□□ -1.42
LTN1-204ENST00000475344 CASS4Q9NQ75 786 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 SYBUQ9NX95 663 aa6.17□□□□□ -1.42
LTN1-204ENST00000475344 EPN1Q9Y6I3 576 aaPredicted RBP6.17□□□□□ -1.42
LTN1-204ENST00000475344 KLHL33A6NCF5 533 aa6.16□□□□□ -1.42
LTN1-204ENST00000475344 KATNA1O75449 491 aa6.16□□□□□ -1.42
LTN1-204ENST00000475344 EGR2P11161 476 aaPredicted RBP6.16□□□□□ -1.42
LTN1-204ENST00000475344 CDK11BP21127 795 aaKnown RBP6.16□□□□□ -1.42
LTN1-204ENST00000475344 CDKN1CP49918 316 aaPredicted RBP6.16□□□□□ -1.42
LTN1-204ENST00000475344 SEC24CP53992 1094 aa6.16□□□□□ -1.42
LTN1-204ENST00000475344 EVA1CP58658 441 aa6.16□□□□□ -1.42
LTN1-204ENST00000475344 ATP8B2P98198 1209 aa6.16□□□□□ -1.42
LTN1-204ENST00000475344 FOXI1Q12951 378 aa6.16□□□□□ -1.42
LTN1-204ENST00000475344 MTMR1Q13613 665 aa6.16□□□□□ -1.42
LTN1-204ENST00000475344 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.16□□□□□ -1.42
LTN1-204ENST00000475344 SSH1Q8WYL5 1049 aa6.16□□□□□ -1.42
LTN1-204ENST00000475344 Q96MF0 132 aa6.16□□□□□ -1.42
LTN1-204ENST00000475344 COQ10AQ96MF6 247 aa6.16□□□□□ -1.42
LTN1-204ENST00000475344 ZAR1LA6NP61 321 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 FDXRP22570 491 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 ADRA1BP35368 520 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 CTXN1P60606 82 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 KIF23Q02241 960 aaPredicted RBP6.15□□□□□ -1.42
LTN1-204ENST00000475344 MPP3Q13368 585 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 INAVAQ3KP66 663 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 STRIP1Q5VSL9 837 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 DPY19L2P1Q6NXN4 242 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 PNMA8AQ86V59 439 aaPredicted RBP6.15□□□□□ -1.42
LTN1-204ENST00000475344 DCBLD1Q8N8Z6 715 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 LINC00476Q8WZB0 136 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 HDAC10Q969S8 669 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 PNKPQ96T60 521 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 GALNT9Q9HCQ5 603 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 TBCCD1Q9NVR7 557 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 KCNE5Q9UJ90 142 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 MRFAP1Q9Y605 127 aa6.15□□□□□ -1.42
LTN1-204ENST00000475344 PCDHGA12O60330 932 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 TGM1P22735 817 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 CXCR5P32302 372 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 BLOC1S1P78537 153 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 TARDBPQ13148 414 aaKnown RBP eCLIP6.14□□□□□ -1.43
LTN1-204ENST00000475344 IL10RAQ13651 578 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 PCBP2Q15366 365 aaKnown RBP eCLIP6.14□□□□□ -1.43
LTN1-204ENST00000475344 ERCC6LQ2NKX8 1250 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 NUP133Q8WUM0 1156 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 PTCD3Q96EY7 689 aaKnown RBP6.14□□□□□ -1.43
LTN1-204ENST00000475344 FAM30AQ9NZY2 134 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 HSFX1Q9UBD0 423 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 PCDHGA9Q9Y5G4 932 aaKnown RBP6.14□□□□□ -1.43
LTN1-204ENST00000475344 PCDHGA8Q9Y5G5 932 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 PCDHGA7Q9Y5G6 932 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 PCDHGA6Q9Y5G7 932 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 PCDHGA3Q9Y5H0 932 aa6.14□□□□□ -1.43
LTN1-204ENST00000475344 GRM6O15303 877 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 HAUS5O94927 633 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 SBK3P0C264 359 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 CDC42EP1Q00587 391 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 SCAPQ12770 1279 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 CYP2A13Q16696 494 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 PTPN21Q16825 1174 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 UAP1L1Q3KQV9 507 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 C3orf36Q3SXR2 165 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 FAM43AQ8N2R8 423 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 PRPF38AQ8NAV1 312 aaKnown RBP6.13□□□□□ -1.43
LTN1-204ENST00000475344 NLGN4YQ8NFZ3 816 aaPredicted RBP6.13□□□□□ -1.43
LTN1-204ENST00000475344 KAT5Q92993 513 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 NACC2Q96BF6 587 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 BOD1Q96IK1 185 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 TEKT5Q96M29 485 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 SMAD5Q99717 465 aaKnown RBP6.13□□□□□ -1.43
LTN1-204ENST00000475344 SYNPO2LQ9H987 977 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 LIMCH1Q9UPQ0 1083 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 CDYLQ9Y232 598 aa6.13□□□□□ -1.43
LTN1-204ENST00000475344 SHTN1A0MZ66 631 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 CCDC154A6NI56 674 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 HTRA2O43464 458 aaPredicted RBP6.12□□□□□ -1.43
LTN1-204ENST00000475344 AGFG2O95081 481 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 ESRRBO95718 433 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 FCER1AP12319 257 aa6.12□□□□□ -1.43
LTN1-204ENST00000475344 ZNF280AP59817 542 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms