RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 PKN2Q16513 984 aaKnown RBP19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 PRR16Q569H4 304 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 RELL1Q8IUW5 271 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 PPFIBP2Q8ND30 876 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 GRK7Q8WTQ7 553 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 MBOAT7Q96N66 472 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 NDNQ99608 321 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 LRRC4BQ9NT99 713 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 ARL8BQ9NVJ2 186 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 SMG5Q9UPR3 1016 aaKnown RBP19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 COL14A1Q05707 1796 aaKnown RBP19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 TM4SF1P30408 202 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 MAN1A1P33908 653 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 PTCD3Q96EY7 689 aaKnown RBP19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 SMC6Q96SB8 1091 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 PLVAPQ9BX97 442 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 ANO3Q9BYT9 981 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 DCLK3Q9C098 648 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 SYNCQ9H7C4 482 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 KANSL3Q9P2N6 904 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 DCTN4Q9UJW0 460 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 TAF1LQ8IZX4 1826 aa19.76■□□□□ 0.75
ECHDC1-214ENST00000474289 WNK3Q9BYP7 1800 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 USP17L10C9JJH3 530 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 MAP3K7O43318 606 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 SGPL1O95470 568 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 ABHD2P08910 425 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 KRT15P19012 456 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 MAGEA4P43358 317 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 CNPY1Q3B7I2 92 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 WDR72Q3MJ13 1102 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 FYB2Q5VWT5 728 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 MYCT1Q8N699 235 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 EPS8L1Q8TE68 723 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 ZNF75CPQ92670 426 aaPredicted RBP19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 ACP6Q9NPH0 428 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 R3HDM2Q9Y2K5 976 aaKnown RBP19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 ZBTB5O15062 677 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 CYP1A1P04798 512 aaPredicted RBP19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 CYP1A2P05177 515 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 NEK3P51956 506 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 MCL1Q07820 350 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 BFSP1Q12934 665 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 GSTA3Q16772 222 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 NOP9Q86U38 636 aaKnown RBP19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 RDH13Q8NBN7 331 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 STMN2Q93045 179 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 ZNF653Q96CK0 615 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 RBM15Q96T37 977 aaKnown RBP eCLIP19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 AGPAT3Q9NRZ7 376 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 RABGAP1Q9Y3P9 1069 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 NEU2Q9Y3R4 380 aa19.75■□□□□ 0.75
ECHDC1-214ENST00000474289 SBF2Q86WG5 1849 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 CFAP69A5D8W1 941 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 POC1B-GALNT4F8VUJ3 575 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 PDLIM1O00151 329 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 GYG2O15488 501 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 FAM13AO94988 1023 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 ZWINTO95229 277 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 LYNP07948 512 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 ZCCHC18P0CG32 403 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 GZMAP12544 262 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 GAP43P17677 238 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 RASIP1Q5U651 963 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 HHATQ5VTY9 493 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 IZUMO3Q5VZ72 239 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 RINT1Q6NUQ1 792 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 HS2ST1Q7LGA3 356 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 SLC5A5Q92911 643 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 DMAC2Q9NW81 257 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 ZNF212Q9UDV6 495 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 NOCTQ9UK39 431 aaKnown RBP19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 WASF2Q9Y6W5 498 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 PLSCR1O15162 318 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 USP4Q13107 963 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 NFIXQ14938 502 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 SDCCAG8Q86SQ7 713 aaPredicted RBP19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 RFWD2Q8NHY2 731 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 ZNF398Q8TD17 642 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 KAT5Q92993 513 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 MCUR1Q96AQ8 359 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 OPTNQ96CV9 577 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 SETDB2Q96T68 719 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 SPATA16Q9BXB7 569 aa19.74■□□□□ 0.75
ECHDC1-214ENST00000474289 TYROBPO43914 113 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 HAUS5O94927 633 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 MAPK6Q16659 721 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 LVRNQ6Q4G3 990 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 SCYL3Q8IZE3 742 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 NCSTNQ92542 709 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 CFAP57Q96MR6 1250 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 NR1H4Q96RI1 486 aaPredicted RBP19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 GTF3C4Q9UKN8 822 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 G3BP2Q9UN86 482 aaKnown RBP19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 CREB3O43889 395 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 DLG4P78352 724 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 OVGP1Q12889 678 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 SLC15A2Q16348 729 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 PABPC1LQ4VXU2 614 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms