RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 TRIOO75962 3097 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 A0A0B4J269 797 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 FRMD3A2A2Y4 597 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 LACTBL1A8MY62 500 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 TRAPPC3O43617 180 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 C1RP00736 705 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 IDEP14735 1019 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 GAP43P17677 238 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 ENOX2Q16206 610 aaKnown RBP19.54■□□□□ 0.72
UPF3A-203ENST00000474056 E2F4Q16254 413 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 AXDND1Q5T1B0 1012 aaPredicted RBP19.54■□□□□ 0.72
UPF3A-203ENST00000474056 PDXDC1Q6P996 788 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 ELMSAN1Q6PJG2 1045 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 HDAC7Q8WUI4 952 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 KIF12Q96FN5 646 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 STRA6Q9BX79 667 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 MRPL44Q9H9J2 332 aaKnown RBP19.54■□□□□ 0.72
UPF3A-203ENST00000474056 MTRRQ9UBK8 725 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 FBXW11Q9UKB1 542 aa19.54■□□□□ 0.72
UPF3A-203ENST00000474056 NOTCH4Q99466 2003 aa19.53■□□□□ 0.72
UPF3A-203ENST00000474056 PRR33A8MZF0 331 aa19.53■□□□□ 0.72
UPF3A-203ENST00000474056 RPL9P32969 192 aaKnown RBP19.53■□□□□ 0.72
UPF3A-203ENST00000474056 PPP2R3AQ06190 1150 aa19.53■□□□□ 0.72
UPF3A-203ENST00000474056 KCNA1Q09470 495 aa19.53■□□□□ 0.72
UPF3A-203ENST00000474056 KYAT1Q16773 422 aa19.53■□□□□ 0.72
UPF3A-203ENST00000474056 RSPO2Q6UXX9 243 aaPredicted RBP19.53■□□□□ 0.72
UPF3A-203ENST00000474056 CCDC149Q6ZUS6 474 aa19.53■□□□□ 0.72
UPF3A-203ENST00000474056 TDRD5Q8NAT2 981 aaKnown RBP19.53■□□□□ 0.72
UPF3A-203ENST00000474056 EDAQ92838 391 aa19.53■□□□□ 0.72
UPF3A-203ENST00000474056 ZNF707Q96C28 371 aaPredicted RBP19.53■□□□□ 0.72
UPF3A-203ENST00000474056 HVCN1Q96D96 273 aa19.53■□□□□ 0.72
UPF3A-203ENST00000474056 FGFBP2Q9BYJ0 223 aa19.53■□□□□ 0.72
UPF3A-203ENST00000474056 RPF1Q9H9Y2 349 aaKnown RBP19.53■□□□□ 0.72
UPF3A-203ENST00000474056 CPSF3Q9UKF6 684 aaKnown RBP19.53■□□□□ 0.72
UPF3A-203ENST00000474056 PCDHA7Q9UN72 937 aa19.53■□□□□ 0.72
UPF3A-203ENST00000474056 TSC2P49815 1807 aa19.53■□□□□ 0.72
UPF3A-203ENST00000474056 ZNF318Q5VUA4 2279 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 GCNT3O95395 438 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 PAPLNO95428 1278 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 ADRB2P07550 413 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 OR1D2P34982 312 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 GUCY2FP51841 1108 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 CASP5P51878 434 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 ZXDAP98168 799 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 DNM1Q05193 864 aaKnown RBP19.52■□□□□ 0.72
UPF3A-203ENST00000474056 KCNG4Q8TDN1 519 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 SMG7Q92540 1137 aaKnown RBP19.52■□□□□ 0.72
UPF3A-203ENST00000474056 DHX58Q96C10 678 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 RHOBTB2Q9BYZ6 727 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 OLFML3Q9NRN5 406 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 PANK4Q9NVE7 773 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 ZDHHC7Q9NXF8 308 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 UBQLN1Q9UMX0 589 aaKnown RBP19.52■□□□□ 0.72
UPF3A-203ENST00000474056 USTQ9Y2C2 406 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 NUB1Q9Y5A7 615 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 CDY1Q9Y6F8 540 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 STYXL1Q9Y6J8 313 aa19.52■□□□□ 0.72
UPF3A-203ENST00000474056 ZMYND10O75800 440 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 LRPAP1P30533 357 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 MCM4P33991 863 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 ACOT2P49753 483 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 ZBTB6Q15916 424 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 PTPN21Q16825 1174 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 VARS2Q5ST30 1063 aaKnown RBP19.51■□□□□ 0.71
UPF3A-203ENST00000474056 L1TD1Q5T7N2 865 aaKnown RBP19.51■□□□□ 0.71
UPF3A-203ENST00000474056 ADALQ6DHV7 355 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 ANKS3Q6ZW76 656 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 FAM212AQ96EL1 285 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 PRKD2Q9BZL6 878 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 TNMDQ9H2S6 317 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 KBTBD4Q9NVX7 518 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 AGO2Q9UKV8 859 aaKnown RBP19.51■□□□□ 0.71
UPF3A-203ENST00000474056 CLUHO75153 1309 aa19.51■□□□□ 0.71
UPF3A-203ENST00000474056 SYN3O14994 580 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 CYP3A5P20815 502 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 ADSSP30520 456 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 RAB33AQ14088 237 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 ATL3Q6DD88 541 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 JADE1Q6IE81 842 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 SLFN12LQ6IEE8 588 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 CYP26C1Q6V0L0 522 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 ZDHHC14Q8IZN3 488 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 SUSD3Q96L08 255 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 ACCSQ96QU6 501 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 CUEDC2Q9H467 287 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 WDR6Q9NNW5 1121 aaKnown RBP19.5■□□□□ 0.71
UPF3A-203ENST00000474056 ZDHHC9Q9Y397 364 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 BACE2Q9Y5Z0 518 aa19.5■□□□□ 0.71
UPF3A-203ENST00000474056 PPEF2O14830 753 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 N4BP1O75113 896 aaKnown RBP19.49■□□□□ 0.71
UPF3A-203ENST00000474056 ASGR2P07307 311 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 C8AP07357 584 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 NFICP08651 508 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 ME1P48163 572 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 LIN9Q5TKA1 542 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 CRELD2Q6UXH1 353 aaPredicted RBP19.49■□□□□ 0.71
UPF3A-203ENST00000474056 HFE2Q6ZVN8 426 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 CCDC65Q8IXS2 484 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 IQUBQ8NA54 791 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 POMGNT1Q8WZA1 660 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms