RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 DCLK3Q9C098 648 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 MMADHCQ9H3L0 296 aaPredicted RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 SYNCQ9H7C4 482 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 JMJD4Q9H9V9 463 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 UBN1Q9NPG3 1134 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 ACP6Q9NPH0 428 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 GALNT8Q9NY28 637 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 ZFP69BQ9UJL9 534 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 GMEB1Q9Y692 573 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 COMMD3-BMI1R4GMX3 469 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 IGKV6D-41A0A0C4DH26 115 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 RASA4BC9J798 803 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 RASA4O43374 803 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 FTLP02792 175 aaPredicted RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 EPS15P42566 896 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 MAP3K10Q02779 954 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 SETDB1Q15047 1291 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 CLEC16AQ2KHT3 1053 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 KIAA0825Q8IV33 1275 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 ZNF398Q8TD17 642 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 ZNF75CPQ92670 426 aaPredicted RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 ZDHHC7Q9NXF8 308 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 STX8Q9UNK0 236 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 ALDH1B1P30837 517 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 DLG4P78352 724 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 CDR2Q01850 454 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 TBL3Q12788 808 aaKnown RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 FASTKD3Q14CZ7 662 aaKnown RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 LRRC23Q53EV4 343 aaPredicted RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 PANX3Q96QZ0 392 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 DHRS4Q9BTZ2 278 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 PHACTR1Q9C0D0 580 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 C17orf75Q9HAS0 396 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 TMCO1Q9UM00 188 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 FOCADQ5VW36 1801 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 A6NJR5 290 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 SLC26A4O43511 780 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 ZNF862O60290 1169 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 CCDC22O60826 627 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 DLDP09622 509 aaKnown RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 ZCCHC18P0CG32 403 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 SMIM18P0DKX4 95 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 FDX1P10109 184 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 SKIP12755 728 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 GYS1P13807 737 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 CDC16Q13042 620 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 TRIP13Q15645 432 aaPredicted RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 SLC15A2Q16348 729 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 SH2D5Q6ZV89 423 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 TTC7BQ86TV6 843 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 UBL4BQ8N7F7 174 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 C9orf72Q96LT7 481 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 SETDB2Q96T68 719 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 RAB34Q9BZG1 259 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 RBM38Q9H0Z9 239 aaKnown RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 C12orf65Q9H3J6 166 aaKnown RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 OLFML3Q9NRN5 406 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 LRRC4BQ9NT99 713 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 ZNF536O15090 1300 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 FRMPD2Q68DX3 1309 aaPredicted RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 CREB3O43889 395 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 USP46P62068 366 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 SF3B3Q15393 1217 aaKnown RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 LCA5Q86VQ0 697 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 EPS8L1Q8TE68 723 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 CNKSR2Q8WXI2 1034 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 ECSITQ9BQ95 431 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 EPB41L1Q9H4G0 881 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 EBF3Q9H4W6 596 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 SSU72Q9NP77 194 aaKnown RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 FBXO6Q9NRD1 293 aaPredicted RBP5□□□□□ -1.61
U2SURP-208ENST00000473835 PCDHA12Q9UN75 941 aa5□□□□□ -1.61
U2SURP-208ENST00000473835 VILLO15195 856 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 CALUO43852 315 aaPredicted RBP4.99□□□□□ -1.61
U2SURP-208ENST00000473835 HNRNPCL1O60812 293 aaKnown RBP4.99□□□□□ -1.61
U2SURP-208ENST00000473835 OR6B1O95007 311 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 DHRS4L1P0CG22 281 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 TRIM49P0CI25 452 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 TRIM49CP0CI26 452 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 GPC5P78333 572 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 PLOD1Q02809 727 aaPredicted RBP4.99□□□□□ -1.61
U2SURP-208ENST00000473835 NR1H3Q13133 447 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 STAT4Q14765 748 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 TMED2Q15363 201 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 ZNF746Q6NUN9 644 aaPredicted RBP4.99□□□□□ -1.61
U2SURP-208ENST00000473835 PPP1R18Q6NYC8 613 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 RAPH1Q70E73 1250 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 KSR1Q8IVT5 923 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 PLEKHO2Q8TD55 490 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 DTX3LQ8TDB6 740 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 NAT14Q8WUY8 206 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 KAT5Q92993 513 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 TRAIPQ9BWF2 469 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 RTFDC1Q9BY42 306 aaPredicted RBP4.99□□□□□ -1.61
U2SURP-208ENST00000473835 VAT1LQ9HCJ6 419 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 KCNQ5Q9NR82 932 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 VAV3Q9UKW4 847 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 BCS1LQ9Y276 419 aa4.99□□□□□ -1.61
U2SURP-208ENST00000473835 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.99□□□□□ -1.61
U2SURP-208ENST00000473835 COL5A3P25940 1745 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms