RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 FNBP1Q96RU3 617 aa20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 CGRRF1Q99675 332 aa20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 DUSP9Q99956 384 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 PAAF1Q9BRP4 392 aa20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 MARCH5Q9NX47 278 aa20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 PRG3Q9Y2Y8 225 aaPredicted RBP20.56■□□□□ 0.88
CTDSP1-207ENST00000473420 PODXLO00592 558 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 CLCNKBP51801 687 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 STX1AQ16623 288 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 TMEM173Q86WV6 379 aaPredicted RBP20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 FAM186BQ8IYM0 893 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 DEFB123Q8N688 67 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 SPPL3Q8TCT6 385 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 PARD3BQ8TEW8 1205 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 GDPD5Q8WTR4 605 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 ANKRD36BP1Q96IX9 119 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 PRDM12Q9H4Q4 367 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 INTS13Q9NVM9 706 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 ANO10Q9NW15 660 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 LMCD1Q9NZU5 365 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 PUF60Q9UHX1 559 aaKnown RBP20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 ADAM28Q9UKQ2 775 aa20.55■□□□□ 0.88
CTDSP1-207ENST00000473420 TRANK1O15050 2925 aa20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 LPXNO60711 386 aa20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 EFEMP2O95967 443 aa20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 TMEM191BP0C7N4 346 aa20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 EPB41P11171 864 aaKnown RBP20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 AP3M2P53677 418 aa20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 STX17P56962 302 aa20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 CLDN10P78369 228 aa20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 FILIP1Q7Z7B0 1213 aa20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 DDX53Q86TM3 631 aaKnown RBP20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 CSGALNACT2Q8N6G5 542 aa20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 BCL7CQ8WUZ0 217 aaPredicted RBP20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 GZF1Q9H116 711 aaPredicted RBP20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 ALG13Q9NP73 1137 aaKnown RBP20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 DPP3Q9NY33 737 aa20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 CACNG4Q9UBN1 327 aa20.54■□□□□ 0.88
CTDSP1-207ENST00000473420 ANO9A1A5B4 782 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 KIF4AO95239 1232 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 FGFR1OPO95684 399 aaKnown RBP20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 DLATP10515 647 aaKnown RBP20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 KRT13P13646 458 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 TNNI1P19237 187 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 POU3F3P20264 500 aaPredicted RBP20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 PAX3P23760 479 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 TFAMQ00059 246 aaKnown RBP20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 BFSP1Q12934 665 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 DUOXA2Q1HG44 320 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 Q7L0L9 218 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 RNF168Q8IYW5 571 aaPredicted RBP20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 PLEKHO2Q8TD55 490 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 POF1BQ8WVV4 589 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 CCDC127Q96BQ5 260 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 BORCS6Q96GS4 357 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 FAM161BQ96MY7 647 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 ITGA11Q9UKX5 1188 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 MYO9BQ13459 2157 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 PTPRJQ12913 1337 aa20.53■□□□□ 0.88
CTDSP1-207ENST00000473420 LRRIQ3A6PVS8 624 aaPredicted RBP20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 RFXAPO00287 272 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 IKBKBO14920 756 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 GRM6O15303 877 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 TADA2AO75478 443 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 B3GAT3O94766 335 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 TNNC2P02585 160 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 VAMP7P51809 220 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 TYRO3Q06418 890 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 ELAVL2Q12926 359 aaKnown RBP20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 PTPROQ16827 1216 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 FUT10Q6P4F1 479 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 C1orf127Q8N9H9 656 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 C3orf58Q8NDZ4 430 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 RABGGTAQ92696 567 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 MED15Q96RN5 788 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 GAS2L1Q99501 681 aaPredicted RBP20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 METTL14Q9HCE5 456 aaKnown RBP20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 MTMR10Q9NXD2 777 aa20.52■□□□□ 0.88
CTDSP1-207ENST00000473420 SF3B1O75533 1304 aaKnown RBP eCLIP20.52■□□□□ 0.873e-6■■■■■ 90.4
CTDSP1-207ENST00000473420 SCN1AP35498 2009 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 F8W810 466 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 PIRO00625 290 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 GNA14O95837 355 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 GUCY2FP51841 1108 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 C9orf57Q5W0N0 161 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 LMBRD2Q68DH5 695 aaPredicted RBP20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 PDE12Q6L8Q7 609 aaKnown RBP20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 CD300LGQ6UXG3 332 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 FRMD5Q7Z6J6 570 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 OR5B17Q8NGF7 314 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 MRPL38Q96DV4 380 aaKnown RBP20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 EEF2KMTQ96G04 330 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 HERC2P3Q9BVR0 1158 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 VN1R3Q9BXE9 311 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 SRRTQ9BXP5 876 aaKnown RBP20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 MTMR12Q9C0I1 747 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 TLR9Q9NR96 1032 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 VWA8A3KMH1 1905 aa20.51■□□□□ 0.87
CTDSP1-207ENST00000473420 TRAPPC3O43617 180 aa20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 SOD2P04179 222 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms