RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 CACTINQ8WUQ7 758 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 CASD1Q96PB1 797 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 SLC9A7Q96T83 725 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 MRPL9Q9BYD2 267 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 XPO4Q9C0E2 1151 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 SLC38A7Q9NVC3 462 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 TBC1D13Q9NVG8 400 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 DPP3Q9NY33 737 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 SLC4A7Q9Y6M7 1214 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 TBKBP1A7MCY6 615 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 AP5Z1O43299 807 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 CBFA2T2O43439 604 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 PHACTR2O75167 634 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 DGKIO75912 1065 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 C4BPAP04003 597 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 ITGB3P05106 788 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 NAB2Q15742 525 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 PAN2Q504Q3 1202 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 C9orf50Q5SZB4 431 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 RASIP1Q5U651 963 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 TRAPPC11Q7Z392 1133 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 LRRC43Q8N309 656 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 C1orf127Q8N9H9 656 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 RSPH1Q8WYR4 309 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 NAP1L5Q96NT1 182 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 UBE2OQ9C0C9 1292 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 RC3H2Q9HBD1 1191 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 GOLGA2P5Q9HBQ8 144 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 RTN4Q9NQC3 1192 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 KANSL3Q9P2N6 904 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 ITGA11Q9UKX5 1188 aa13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC12-217ENST00000473348 PMM2O15305 246 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 P4HA2O15460 535 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 TEX33O43247 280 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 HLA-DRAP01903 254 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 TPM3P06753 285 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 KRT19P08727 400 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 CYP3A5P20815 502 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 POLR2BP30876 1174 aaKnown RBP13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 PIK3CAP42336 1068 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 UBXN1Q04323 297 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 RNASELQ05823 741 aaKnown RBP13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 CETN1Q12798 172 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 TUSC3Q13454 348 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 NR1I3Q14994 352 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 FBXL13Q8NEE6 735 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 TAS1R2Q8TE23 839 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 RNPC3Q96LT9 517 aaKnown RBP13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 FAM193BQ96PV7 902 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 GDF15Q99988 308 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 TRIM5Q9C035 493 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 GCNT4Q9P109 453 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 CACNG4Q9UBN1 327 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 SIX4Q9UIU6 781 aa13.54□□□□□ -0.24
TRAPPC12-217ENST00000473348 GTPBP10A4D1E9 387 aaKnown RBP13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 CASTOR2A6NHX0 329 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 B4GALT3O60512 393 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 GJB5O95377 273 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 VNN1O95497 513 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 MRE11P49959 708 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 DSC1Q08554 894 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 TRPC3Q13507 836 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 NCOA4Q13772 614 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 SHHQ15465 462 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 PTPN21Q16825 1174 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 EPC2Q52LR7 807 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 C9orf57Q5W0N0 161 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 SCARA3Q6AZY7 606 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 GBP6Q6ZN66 633 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 ZNF280BQ86YH2 543 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 HERC6Q8IVU3 1022 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 CMTR2Q8IYT2 770 aaKnown RBP13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 PHOSPHO2Q8TCD6 241 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 ZNF689Q96CS4 500 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 YME1L1Q96TA2 773 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 CRACR2AQ9BSW2 395 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 ZBED2Q9BTP6 218 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 HCSTQ9UBK5 93 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 AGAP1Q9UPQ3 857 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 COQ4Q9Y3A0 265 aa13.53□□□□□ -0.24
TRAPPC12-217ENST00000473348 ATG2AQ2TAZ0 1938 aa13.52□□□□□ -0.24
TRAPPC12-217ENST00000473348 MYH10P35580 1976 aa13.52□□□□□ -0.24
TRAPPC12-217ENST00000473348 DDHD2O94830 711 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 CLSTN1O94985 981 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 LRPAP1P30533 357 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 ZNF75DP51815 510 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 HTRA4P83105 476 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 BTG3Q14201 252 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 SYCP1Q15431 976 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 EXOC3L4Q17RC7 722 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 CXorf38Q8TB03 319 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 SEMA4DQ92854 862 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 UROC1Q96N76 676 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 ERGIC2Q96RQ1 377 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 IMPG2Q9BZV3 1241 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 INTS2Q9H0H0 1204 aaKnown RBP13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 NRDE2Q9H7Z3 1164 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 RAB20Q9NX57 234 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms