RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 SLC19A1P41440 591 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 PDE4CQ08493 712 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 SCRN1Q12765 414 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 PRPF4BQ13523 1007 aaKnown RBP7.63□□□□□ -1.19
CKS1B-205ENST00000473344 PPP2R5DQ14738 602 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 MAPK6Q16659 721 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 RSPO4Q2I0M5 234 aaPredicted RBP7.63□□□□□ -1.19
CKS1B-205ENST00000473344 UVSSAQ2YD98 709 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 RSPO2Q6UXX9 243 aaPredicted RBP7.63□□□□□ -1.19
CKS1B-205ENST00000473344 ZNF852Q6ZMS4 543 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 TPRG1Q6ZUI0 275 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 MAML2Q8IZL2 1156 aaPredicted RBP7.63□□□□□ -1.19
CKS1B-205ENST00000473344 MCPH1Q8NEM0 835 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 ITFG1Q8TB96 612 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 HSD17B14Q9BPX1 270 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 KXD1Q9BQD3 176 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 OSBPL6Q9BZF3 934 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 TM6SF1Q9BZW5 370 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 C2orf40Q9H1Z8 148 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 GJB4Q9NTQ9 266 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 SNTG2Q9NY99 539 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 KCNH3Q9ULD8 1083 aa7.63□□□□□ -1.19
CKS1B-205ENST00000473344 MRPS17Q9Y2R5 130 aaKnown RBP7.63□□□□□ -1.19
CKS1B-205ENST00000473344 MRPS23Q9Y3D9 190 aaKnown RBP7.63□□□□□ -1.19
CKS1B-205ENST00000473344 C2orf16Q68DN1 1984 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 RECQL4O94761 1208 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 LRG1P02750 347 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 XRCC6P12956 609 aaKnown RBP eCLIP7.62□□□□□ -1.19
CKS1B-205ENST00000473344 ELF1P32519 619 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 LMNB2Q03252 620 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 NR5A1Q13285 461 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 RAB33AQ14088 237 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 TRIM29Q14134 588 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 SKOR2Q2VWA4 1001 aaPredicted RBP7.62□□□□□ -1.19
CKS1B-205ENST00000473344 EARS2Q5JPH6 523 aaKnown RBP7.62□□□□□ -1.19
CKS1B-205ENST00000473344 RTL10Q7L3V2 364 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 APBB1IPQ7Z5R6 666 aaPredicted RBP7.62□□□□□ -1.19
CKS1B-205ENST00000473344 NOSTRINQ8IVI9 506 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 NPAS3Q8IXF0 933 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 SUMF1Q8NBK3 374 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 DEPTORQ8TB45 409 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 ING5Q8WYH8 240 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 MCRS1Q96EZ8 462 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 DDX23Q9BUQ8 820 aaKnown RBP7.62□□□□□ -1.19
CKS1B-205ENST00000473344 LTB4R2Q9NPC1 389 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 GPRC5CQ9NQ84 441 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 RRAGDQ9NQL2 400 aaPredicted RBP7.62□□□□□ -1.19
CKS1B-205ENST00000473344 HCFC1R1Q9NWW0 138 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 ZSCAN32Q9NX65 697 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 ORC3Q9UBD5 711 aaPredicted RBP7.62□□□□□ -1.19
CKS1B-205ENST00000473344 CDV3Q9UKY7 258 aaKnown RBP7.62□□□□□ -1.19
CKS1B-205ENST00000473344 RAB23Q9ULC3 237 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 USP18Q9UMW8 372 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 GDAQ9Y2T3 454 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 MTF2Q9Y483 593 aaPredicted RBP7.62□□□□□ -1.19
CKS1B-205ENST00000473344 CDY1Q9Y6F8 540 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 MYO10Q9HD67 2058 aa7.62□□□□□ -1.19
CKS1B-205ENST00000473344 WDR81Q562E7 1941 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 A0A087WWV3 80 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 PRR5-ARHGAP8B1AHC4 643 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 ESPNB1AK53 854 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 ACKR2O00590 384 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 PRRG1O14668 218 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 PTGESO14684 152 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 ADAM12O43184 909 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 ECI2O75521 394 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 PRKCBP05771 671 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 POU2F2P09086 479 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 PTPN2P17706 415 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 RPS9P46781 194 aaKnown RBP7.61□□□□□ -1.19
CKS1B-205ENST00000473344 CLCNKBP51801 687 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 NRLP54845 237 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 ARHGAP8P85298 464 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 PRR20EP86478 221 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 PRR20CP86479 221 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 PRR20DP86480 221 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 PRR20BP86481 221 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 PRR20AP86496 221 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 ADCY1Q08828 1119 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 PPP2R5AQ15172 486 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 ANKRD1Q15327 319 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 FAM187BQ17R55 369 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 DCAF4L1Q3SXM0 396 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 HS1BP3Q53T59 392 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 CDCA2Q69YH5 1023 aaPredicted RBP7.61□□□□□ -1.19
CKS1B-205ENST00000473344 TSSK4Q6SA08 328 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 ANKS3Q6ZW76 656 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 ZBTB44Q8NCP5 570 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 ELSPBP1Q96BH3 223 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 UROC1Q96N76 676 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 NACC1Q96RE7 527 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 FAM126AQ9BYI3 521 aaPredicted RBP7.61□□□□□ -1.19
CKS1B-205ENST00000473344 FZD8Q9H461 694 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 PDZD7Q9H5P4 517 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 HEBP1Q9NRV9 189 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 GDE1Q9NZC3 331 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 DNMT3BQ9UBC3 853 aaKnown RBP7.61□□□□□ -1.19
CKS1B-205ENST00000473344 MTRRQ9UBK8 725 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 GMEB2Q9UKD1 530 aa7.61□□□□□ -1.19
CKS1B-205ENST00000473344 SMG5Q9UPR3 1016 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms