RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 PLIN2Q99541 437 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 PTPRHQ9HD43 1115 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 TNFSF13BQ9Y275 285 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 PCDHB6Q9Y5E3 794 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 ZFP37Q9Y6Q3 630 aaPredicted RBP12.3□□□□□ -0.44
ACTB-209ENST00000473257 NCANO14594 1321 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 ABLIM1O14639 778 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 LAMTOR5O43504 91 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 VIPR2P41587 438 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 GRM5P41594 1212 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.442e-53■■□□□ 12.2
ACTB-209ENST00000473257 GUCY2FP51841 1108 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 EFNA5P52803 228 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 FOXK2Q01167 660 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 PTGDRQ13258 359 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 GNL2Q13823 731 aaKnown RBP12.29□□□□□ -0.44
ACTB-209ENST00000473257 FAM78AQ5JUQ0 283 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 ANKS3Q6ZW76 656 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 KIFAP3Q92845 792 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 SHDQ96IW2 340 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 TCHPQ9BT92 498 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 MMTAG2Q9BU76 263 aaKnown RBP12.29□□□□□ -0.44
ACTB-209ENST00000473257 BCO2Q9BYV7 579 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 FOXP1Q9H334 677 aaPredicted RBP12.29□□□□□ -0.44
ACTB-209ENST00000473257 CYP4F11Q9HBI6 524 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 ANKFY1Q9P2R3 1169 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 TUBGCP4Q9UGJ1 667 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 FBXL5Q9UKA1 691 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 NDRG2Q9UN36 371 aaKnown RBP12.29□□□□□ -0.44
ACTB-209ENST00000473257 LIMCH1Q9UPQ0 1083 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 TIMM13Q9Y5L4 95 aaPredicted RBP12.29□□□□□ -0.44
ACTB-209ENST00000473257 BACE2Q9Y5Z0 518 aa12.29□□□□□ -0.44
ACTB-209ENST00000473257 CHD8Q9HCK8 2581 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 PATJQ8NI35 1801 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 NPHP3-ACAD11A0A0J9YXS1 232 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 TBC1D4O60343 1298 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 LRG1P02750 347 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 OR4Q2P0C623 313 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 HOXC13P31276 330 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 RBM25P49756 843 aaKnown RBP12.28□□□□□ -0.44
ACTB-209ENST00000473257 YARSP54577 528 aaKnown RBP12.28□□□□□ -0.44
ACTB-209ENST00000473257 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
ACTB-209ENST00000473257 PRKCQQ04759 706 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 FZD5Q13467 585 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 LPAL2Q16609 132 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 UVSSAQ2YD98 709 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 XKR4Q5GH76 650 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 PRSS36Q5K4E3 855 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 HAUS3Q68CZ6 603 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 PDXDC1Q6P996 788 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 ERMP1Q7Z2K6 904 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 DGLUCYQ7Z3D6 616 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 FBXO18Q8NFZ0 1043 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 RUBCNQ92622 972 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 UROC1Q96N76 676 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 CCDC94Q9BW85 323 aaPredicted RBP12.28□□□□□ -0.44
ACTB-209ENST00000473257 HAPLN2Q9GZV7 340 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 KMT5AQ9NQR1 393 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 CEP72Q9P209 647 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 KCNH3Q9ULD8 1083 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 INSL5Q9Y5Q6 135 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 PHLPP2Q6ZVD8 1323 aa12.28□□□□□ -0.44
ACTB-209ENST00000473257 ACACBO00763 2458 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 ARHGEF37A1IGU5 675 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 KINO60870 393 aaKnown RBP12.27□□□□□ -0.45
ACTB-209ENST00000473257 MOSPD3O75425 235 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 ECI2O75521 394 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 ABLIM3O94929 683 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 POU2F2P09086 479 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 MYL4P12829 197 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 PTPN2P17706 415 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 ELF1P32519 619 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 MTAPQ13126 283 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 RSPO4Q2I0M5 234 aaPredicted RBP12.27□□□□□ -0.45
ACTB-209ENST00000473257 CTXN3Q4LDR2 81 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 ZBTB41Q5SVQ8 909 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 SLC8B1Q6J4K2 584 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 RINT1Q6NUQ1 792 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 ZC3H14Q6PJT7 736 aaKnown RBP12.27□□□□□ -0.45
ACTB-209ENST00000473257 RNF19BQ6ZMZ0 732 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 C1orf186Q6ZWK4 172 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 ZNF461Q8TAF7 563 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 RSPRY1Q96DX4 576 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 TBC1D32Q96NH3 1257 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 PGLYRP2Q96PD5 576 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 MRPL4Q9BYD3 311 aaKnown RBP12.27□□□□□ -0.45
ACTB-209ENST00000473257 CRISPLD1Q9H336 500 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 SEMA4AQ9H3S1 761 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 ARHGAP28Q9P2N2 729 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 NUB1Q9Y5A7 615 aa12.27□□□□□ -0.45
ACTB-209ENST00000473257 PPEF2O14830 753 aa12.26□□□□□ -0.45
ACTB-209ENST00000473257 TRAPPC3O43617 180 aa12.26□□□□□ -0.45
ACTB-209ENST00000473257 SOAT2O75908 522 aa12.26□□□□□ -0.45
ACTB-209ENST00000473257 VNN2O95498 520 aa12.26□□□□□ -0.45
ACTB-209ENST00000473257 CXCL8P10145 99 aa12.26□□□□□ -0.45
ACTB-209ENST00000473257 MCF2P10911 925 aa12.26□□□□□ -0.45
ACTB-209ENST00000473257 KCNE1P15382 129 aa12.26□□□□□ -0.45
ACTB-209ENST00000473257 PROZP22891 400 aa12.26□□□□□ -0.45
ACTB-209ENST00000473257 MCM4P33991 863 aa12.26□□□□□ -0.45
ACTB-209ENST00000473257 PFKPQ01813 784 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms