RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 EXOC1Q9NV70 894 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 KBTBD4Q9NVX7 518 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 PGPEP1Q9NXJ5 209 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 RGL1Q9NZL6 768 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 SEPT3Q9UH03 358 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 NOC2LQ9Y3T9 749 aaKnown RBP7.02□□□□□ -1.29
HDAC1-205ENST00000472928 PCDHB7Q9Y5E2 793 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 PCDHA2Q9Y5H9 948 aa7.02□□□□□ -1.29
HDAC1-205ENST00000472928 NFASCO94856 1347 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 DENND4AQ7Z401 1863 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 MYMKA6NI61 221 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 RRN3P2A6NIE6 340 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 E9PMD0 336 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 DHX15O43143 795 aaKnown RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 EOMESO95936 686 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 CCNE2O96020 404 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 ABL1P00519 1130 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 RPN1P04843 607 aaKnown RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 RPLP2P05387 115 aaKnown RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 MYL1P05976 194 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 TPM2P07951 284 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 PLA2G4BP0C869 781 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 SPATA31C1P0DKV0 1188 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 ZNF165P49910 485 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 FAM189BP81408 668 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 AMPD3Q01432 767 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 ZNF211Q13398 564 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 MORC3Q14149 939 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 CTTNQ14247 550 aaKnown RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 DSC3Q14574 896 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 PLCB4Q15147 1175 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 EPHA7Q15375 998 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 RARS2Q5T160 578 aaKnown RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 NT5DC1Q5TFE4 455 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 ZNF746Q6NUN9 644 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 KCNT2Q6UVM3 1135 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 B3GNT9Q6UX72 402 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 CAPN12Q6ZSI9 719 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 SLC24A5Q71RS6 500 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 SV2BQ7L1I2 683 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 TMC7Q7Z402 723 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 LUZP1Q86V48 1076 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 GPBP1Q86WP2 473 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 CATSPER3Q86XQ3 398 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 TPH2Q8IWU9 490 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 MRPL43Q8N983 215 aaKnown RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 TRIML1Q8N9V2 468 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 SPATA20Q8TB22 786 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 RIN2Q8WYP3 895 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 GLG1Q92896 1179 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 CCDC47Q96A33 483 aaKnown RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 CASD1Q96PB1 797 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 GSDMAQ96QA5 445 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 ADAM2Q99965 735 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 TRIM9Q9C026 710 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 NAT10Q9H0A0 1025 aaKnown RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 SMARCAD1Q9H4L7 1026 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 CBX8Q9HC52 389 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 JPH1Q9HDC5 661 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 CYP26B1Q9NR63 512 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 C1orf112Q9NSG2 853 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 RMND1Q9NWS8 449 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 PUF60Q9UHX1 559 aaKnown RBP7.01□□□□□ -1.29
HDAC1-205ENST00000472928 DACH1Q9UI36 760 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 DUSP12Q9UNI6 340 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 SAMM50Q9Y512 469 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 F5P12259 2224 aa7.01□□□□□ -1.29
HDAC1-205ENST00000472928 DOCK8Q8NF50 2099 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 FRYQ5TBA9 3013 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 SMIM35A0A1B0GVV1 85 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 KRBA1A5PL33 1030 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 M0QZ92 97 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 NARSO43776 548 aaKnown RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 KLRC4O43908 158 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 ICMTO60725 284 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 CAVIN2O95810 425 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 KRT18P05783 430 aaKnown RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 EPCAMP16422 314 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 BMP6P22004 513 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 MUTP22033 750 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 SFNP31947 248 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 PPM1AP35813 382 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 NFX1Q12986 1120 aaKnown RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 NNTQ13423 1086 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 TDGQ13569 410 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 SMC1AQ14683 1233 aaKnown RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 UGCGQ16739 394 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 RSPO4Q2I0M5 234 aaPredicted RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 ATAT1Q5SQI0 421 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 DNAJC14Q6Y2X3 702 aaPredicted RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 DYMQ7RTS9 669 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 ZNF598Q86UK7 904 aaKnown RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 FAM228AQ86W67 206 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 SMYD4Q8IYR2 804 aaPredicted RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 SLC39A11Q8N1S5 342 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 GIMAP8Q8ND71 665 aaPredicted RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 RDM1Q8NG50 284 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 SLC22A17Q8WUG5 538 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 SCG3Q8WXD2 468 aaKnown RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 COL26A1Q96A83 441 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms