RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	MGAT1	P26572	445 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	HDAC1	Q13547	482 aa	Predicted RBP	4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	POLD3	Q15054	466 aa	Predicted RBP	4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	NAIF1	Q69YI7	327 aa	Predicted RBP	4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	ZNF529	Q6P280	563 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	MAMDC4	Q6UXC1	1216 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	SPOCD1	Q6ZMY3	1216 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044		Q6ZSN1	163 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	LIMS2	Q7Z4I7	341 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	PPP1R3B	Q86XI6	285 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	PDSS2	Q86YH6	399 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	KRT78	Q8N1N4	520 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	D2HGDH	Q8N465	521 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	LRTOMT	Q8WZ04	291 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	TFAP2C	Q92754	450 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	ARMT1	Q9H993	441 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	ZMAT3	Q9HA38	289 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	SARS2	Q9NP81	518 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	JKAMP	Q9P055	326 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	CNOT11	Q9UKZ1	510 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044	HDAC5	Q9UQL6	1122 aa		4.82	□□□□□ -1.64
PTCD3-209	ENST00000472044		A0A0G2JLL6	359 aa	Predicted RBP	4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	CFAP69	A5D8W1	941 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	PRSS29P	A6NIE9	313 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	ZNF623	O75123	536 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	MATN4	O95460	622 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	ANXA1	P04083	346 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	MYF5	P13349	255 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	SLC5A1	P13866	664 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	RPL17	P18621	184 aa	Known RBP	4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	COMT	P21964	271 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	PEX2	P28328	305 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	SLC6A4	P31645	630 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	PIK3CG	P48736	1102 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	PICALM	Q13492	652 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	KIF22	Q14807	665 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	VPS72	Q15906	364 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	CCDC93	Q567U6	631 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	C1QL3	Q5VWW1	255 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	PPP4R4	Q6NUP7	873 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	EFCAB12	Q6NXP0	572 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	APOA5	Q6Q788	366 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	SH2D3C	Q8N5H7	860 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	IL31RA	Q8NI17	732 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044		Q8TCH9	128 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	EDA	Q92838	391 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	APIP	Q96GX9	242 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	MRGPRX1	Q96LB2	322 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	NT5C1B	Q96P26	610 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	CPEB1	Q9BZB8	566 aa	Known RBP	4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	BTBD1	Q9H0C5	482 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	NUP62CL	Q9H1M0	184 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	CHST12	Q9NRB3	414 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	PIH1D1	Q9NWS0	290 aa	Known RBP	4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	USP25	Q9UHP3	1055 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	TPCN1	Q9ULQ1	816 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044	PCDHA1	Q9Y5I3	950 aa		4.81	□□□□□ -1.64
PTCD3-209	ENST00000472044		A0A1W2PPL8	197 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	TCRBV7S2A1N4T	A0A589	114 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	ISM1	B1AKI9	464 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	MYO1F	O00160	1098 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	KIAA0391	O15091	583 aa	Known RBP	4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	PMM2	O15305	246 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	CYP27B1	O15528	508 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	MGEA5	O60502	916 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	HAUS5	O94927	633 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	GNAI3	P08754	354 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	HOXA5	P20719	270 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	ARFIP2	P53365	341 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	RABGGTB	P53611	331 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	GNAI1	P63096	354 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	HHEX	Q03014	270 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	KHDC1L	Q5JSQ8	128 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	TTLL10	Q6ZVT0	673 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	ZNF365	Q70YC5	407 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	UBE3B	Q7Z3V4	1068 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	COL23A1	Q86Y22	540 aa	Predicted RBP	4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	SAMD3	Q8N6K7	520 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	FAM89A	Q96GI7	184 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	SUCLG2	Q96I99	432 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	C1orf43	Q9BWL3	253 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	NAA15	Q9BXJ9	866 aa	Known RBP	4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	PACSIN1	Q9BY11	444 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	LRRC27	Q9C0I9	530 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	CD248	Q9HCU0	757 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	CNNM1	Q9NRU3	951 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	FBXO34	Q9NWN3	711 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	CFAP97	Q9P2B7	532 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	JAG2	Q9Y219	1238 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	FAM50B	Q9Y247	325 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	MED16	Q9Y2X0	877 aa		4.8	□□□□□ -1.64
PTCD3-209	ENST00000472044	DRGX	A6NNA5	263 aa		4.79	□□□□□ -1.64
PTCD3-209	ENST00000472044	NPR1	P16066	1061 aa		4.79	□□□□□ -1.64
PTCD3-209	ENST00000472044	RHBDL3	P58872	404 aa		4.79	□□□□□ -1.64
PTCD3-209	ENST00000472044	RAP2B	P61225	183 aa		4.79	□□□□□ -1.64
PTCD3-209	ENST00000472044	SYCP2L	Q5T4T6	812 aa		4.79	□□□□□ -1.64

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