RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 DCP1AQ9NPI6 582 aaPredicted RBP5.03□□□□□ -1.6
LMNB1-205ENST00000472034 COPRSQ9NQ92 184 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 SLC2A4RGQ9NR83 387 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 TYW1Q9NV66 732 aaKnown RBP5.03□□□□□ -1.6
LMNB1-205ENST00000472034 SWAP70Q9UH65 585 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 DDX41Q9UJV9 622 aaKnown RBP5.03□□□□□ -1.6
LMNB1-205ENST00000472034 FEM1BQ9UK73 627 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 ISY1Q9ULR0 285 aaKnown RBP5.03□□□□□ -1.6
LMNB1-205ENST00000472034 CEP83Q9Y592 693 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 COMMD10Q9Y6G5 202 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 CREBBPQ92793 2442 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 FNDC1Q4ZHG4 1894 aaPredicted RBP5.03□□□□□ -1.6
LMNB1-205ENST00000472034 LAMA4Q16363 1823 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 ZFHX3Q15911 3703 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 MYH15Q9Y2K3 1946 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 PTPDC1A2A3K4 754 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 C17orf102A2RUQ5 167 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 SHISA7A6NL88 538 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 TBKBP1A7MCY6 615 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 DHX15O43143 795 aaKnown RBP5.02□□□□□ -1.61
LMNB1-205ENST00000472034 CBFA2T2O43439 604 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 COQ9O75208 318 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 PROCP04070 461 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 GSTP1P09211 210 aaKnown RBP5.02□□□□□ -1.61
LMNB1-205ENST00000472034 UQCRFS1P1P0C7P4 283 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 ZNF806P0C7X5 589 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 ARNTP27540 789 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 HOXC8P31273 242 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 CD52P31358 61 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 MGAT3Q09327 533 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 HTR4Q13639 388 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 DOC2BQ14184 412 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 MLF2Q15773 248 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-205ENST00000472034 TKFCQ3LXA3 575 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 DNTTIP2Q5QJE6 756 aaKnown RBP5.02□□□□□ -1.61
LMNB1-205ENST00000472034 TTC39AQ5SRH9 613 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 ZFYVE27Q5T4F4 411 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 ZKSCAN2Q63HK3 967 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 HEATR6Q6AI08 1181 aaKnown RBP5.02□□□□□ -1.61
LMNB1-205ENST00000472034 CTR9Q6PD62 1173 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 RUFY4Q6ZNE9 571 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 SULF2Q8IWU5 870 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 LCORLQ8N3X6 602 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 SMG8Q8ND04 991 aaKnown RBP5.02□□□□□ -1.61
LMNB1-205ENST00000472034 DEFB124Q8NES8 71 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 MDM1Q8TC05 714 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 SLC22A17Q8WUG5 538 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 KCNB2Q92953 911 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 UTP4Q969X6 686 aaKnown RBP5.02□□□□□ -1.61
LMNB1-205ENST00000472034 CLDN23Q96B33 292 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 CCDC17Q96LX7 622 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 GPR20Q99678 358 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 YIPF2Q9BWQ6 316 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 TMPRSS13Q9BYE2 586 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 RNPEPQ9H4A4 650 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 CWH43Q9H720 699 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 KRT82Q9NSB4 513 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 SETD4Q9NVD3 440 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 CLIP2Q9UDT6 1046 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 ADD3Q9UEY8 706 aaKnown RBP5.02□□□□□ -1.61
LMNB1-205ENST00000472034 CCPG1Q9ULG6 757 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 CYP8B1Q9UNU6 501 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 NUMBLQ9Y6R0 609 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 MGAQ8IWI9 3026 aa5.02□□□□□ -1.61
LMNB1-205ENST00000472034 LOXHD1Q8IVV2 1947 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 MYH4Q9Y623 1939 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 SPAARA0A1B0GVQ0 90 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 EPB41L2O43491 1005 aaKnown RBP5.01□□□□□ -1.61
LMNB1-205ENST00000472034 FBXO24O75426 580 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 ITGB2P05107 769 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 FGFR1P11362 822 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 ST13P50502 369 aaKnown RBP5.01□□□□□ -1.61
LMNB1-205ENST00000472034 USP11P51784 963 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 FOXD4Q12950 439 aaPredicted RBP5.01□□□□□ -1.61
LMNB1-205ENST00000472034 HSDL1Q3SXM5 330 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 SLC44A4Q53GD3 710 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 FBXO47Q5MNV8 452 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 SYDE2Q5VT97 1194 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 SCARA3Q6AZY7 606 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 Q6ZS46 218 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 LRRC55Q6ZSA7 311 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 C16orf86Q6ZW13 317 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 CABP7Q86V35 215 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 AMOTL1Q8IY63 956 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 CHCHD4Q8N4Q1 142 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 CLEC4DQ8WXI8 215 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 ZBTB10Q96DT7 871 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 UBL7Q96S82 380 aaPredicted RBP5.01□□□□□ -1.61
LMNB1-205ENST00000472034 TRIM56Q9BRZ2 755 aaKnown RBP5.01□□□□□ -1.61
LMNB1-205ENST00000472034 C16orf70Q9BSU1 422 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 EDEM2Q9BV94 578 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 KATNAL1Q9BW62 490 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 FAM126AQ9BYI3 521 aaPredicted RBP5.01□□□□□ -1.61
LMNB1-205ENST00000472034 BCAS3Q9H6U6 928 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 NGRNQ9NPE2 291 aaKnown RBP5.01□□□□□ -1.61
LMNB1-205ENST00000472034 TPSG1Q9NRR2 321 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 C2orf42Q9NWW7 574 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 EPS15L1Q9UBC2 864 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 LZTS1Q9Y250 596 aa5.01□□□□□ -1.61
LMNB1-205ENST00000472034 HIF3AQ9Y2N7 669 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms