RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 MSANTD3Q96H12 275 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 AIFM3Q96NN9 605 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 HSD17B14Q9BPX1 270 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 EIF2AK1Q9BQI3 630 aaKnown RBP20.98■□□□□ 0.95
SORT1-203ENST00000471996 SNX14Q9Y5W7 946 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 COL4A2P08572 1712 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 ARNTLO00327 626 aa20.97■□□□□ 0.95
SORT1-203ENST00000471996 ATF2P15336 505 aa20.97■□□□□ 0.95
SORT1-203ENST00000471996 VIPR2P41587 438 aa20.97■□□□□ 0.95
SORT1-203ENST00000471996 CLCNKBP51801 687 aa20.97■□□□□ 0.95
SORT1-203ENST00000471996 SF3A2Q15428 464 aaKnown RBP20.97■□□□□ 0.95
SORT1-203ENST00000471996 CYP4A22Q5TCH4 519 aa20.97■□□□□ 0.95
SORT1-203ENST00000471996 CDCA2Q69YH5 1023 aaPredicted RBP20.97■□□□□ 0.95
SORT1-203ENST00000471996 C1orf228Q6PIY5 440 aa20.97■□□□□ 0.95
SORT1-203ENST00000471996 MFSD6LQ8IWD5 586 aa20.97■□□□□ 0.95
SORT1-203ENST00000471996 TCEAL8Q8IYN2 117 aa20.97■□□□□ 0.95
SORT1-203ENST00000471996 C12orf50Q8NA57 414 aaPredicted RBP20.97■□□□□ 0.95
SORT1-203ENST00000471996 CCDC43Q96MW1 224 aaKnown RBP20.97■□□□□ 0.95
SORT1-203ENST00000471996 NAP1L4Q99733 375 aaKnown RBP20.97■□□□□ 0.95
SORT1-203ENST00000471996 TRPV4Q9HBA0 871 aa20.97■□□□□ 0.95
SORT1-203ENST00000471996 RBM12Q9NTZ6 932 aaKnown RBP20.97■□□□□ 0.95
SORT1-203ENST00000471996 KCNJ14Q9UNX9 436 aa20.97■□□□□ 0.95
SORT1-203ENST00000471996 FAM208BQ5VWN6 2430 aa20.97■□□□□ 0.95
SORT1-203ENST00000471996 ARID2Q68CP9 1835 aa20.97■□□□□ 0.95
SORT1-203ENST00000471996 CNOT1A5YKK6 2376 aaKnown RBP20.96■□□□□ 0.95
SORT1-203ENST00000471996 I3L4J1 428 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 BAG4O95429 457 aaKnown RBP20.96■□□□□ 0.95
SORT1-203ENST00000471996 ZNF806P0C7X5 589 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 HOXA6P31267 233 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 BRCC3P46736 316 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 UPP1Q16831 310 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 ZBTB8OSQ8IWT0 167 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 UROC1Q96N76 676 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 PPP1R10Q96QC0 940 aaKnown RBP20.96■□□□□ 0.95
SORT1-203ENST00000471996 ADPGKQ9BRR6 497 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 ARRDC1-AS1Q9H2J1 176 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 CYP4F11Q9HBI6 524 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 GPRC5CQ9NQ84 441 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 RXFP3Q9NSD7 469 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 GDAQ9Y2T3 454 aa20.96■□□□□ 0.95
SORT1-203ENST00000471996 CPLX1O14810 134 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 AXIN1O15169 862 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 MOSPD3O75425 235 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 SEC24AO95486 1093 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 PRPF4BQ13523 1007 aaKnown RBP20.95■□□□□ 0.94
SORT1-203ENST00000471996 TMEM132AQ24JP5 1023 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 GLRA4Q5JXX5 417 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 STPG1Q5TH74 334 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 Q6ZS52 159 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 WDR5BQ86VZ2 330 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 C3orf58Q8NDZ4 430 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 ZSCAN18Q8TBC5 510 aaPredicted RBP20.95■□□□□ 0.94
SORT1-203ENST00000471996 CSGALNACT1Q8TDX6 532 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 LOXL4Q96JB6 756 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 C2orf42Q9NWW7 574 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 INSL5Q9Y5Q6 135 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 NCANO14594 1321 aa20.95■□□□□ 0.94
SORT1-203ENST00000471996 ASPMQ8IZT6 3477 aa20.94■□□□□ 0.94
SORT1-203ENST00000471996 USO1O60763 962 aaKnown RBP20.94■□□□□ 0.94
SORT1-203ENST00000471996 KCNK5O95279 499 aa20.94■□□□□ 0.94
SORT1-203ENST00000471996 HSPA4P34932 840 aa20.94■□□□□ 0.94
SORT1-203ENST00000471996 WDR44Q5JSH3 913 aa20.94■□□□□ 0.94
SORT1-203ENST00000471996 DGKKQ5KSL6 1271 aa20.94■□□□□ 0.94
SORT1-203ENST00000471996 IQCEQ6IPM2 695 aa20.94■□□□□ 0.94
SORT1-203ENST00000471996 MAEAQ7L5Y9 396 aa20.94■□□□□ 0.94
SORT1-203ENST00000471996 HS6ST3Q8IZP7 471 aa20.94■□□□□ 0.94
SORT1-203ENST00000471996 ELMOD1Q8N336 334 aa20.94■□□□□ 0.94
SORT1-203ENST00000471996 PIGOQ8TEQ8 1089 aa20.94■□□□□ 0.94
SORT1-203ENST00000471996 C8orf33Q9H7E9 229 aaPredicted RBP20.94■□□□□ 0.94
SORT1-203ENST00000471996 FRYQ5TBA9 3013 aa20.93■□□□□ 0.94
SORT1-203ENST00000471996 HEPACAM2A8MVW5 462 aa20.93■□□□□ 0.94
SORT1-203ENST00000471996 XRCC6P12956 609 aaKnown RBP eCLIP20.93■□□□□ 0.94
SORT1-203ENST00000471996 HOXB3P14651 431 aaPredicted RBP20.93■□□□□ 0.94
SORT1-203ENST00000471996 ARPP19P56211 112 aa20.93■□□□□ 0.94
SORT1-203ENST00000471996 CCDC6Q16204 474 aa20.93■□□□□ 0.94
SORT1-203ENST00000471996 MAPK6Q16659 721 aa20.93■□□□□ 0.94
SORT1-203ENST00000471996 PIK3AP1Q6ZUJ8 805 aa20.93■□□□□ 0.94
SORT1-203ENST00000471996 LEMD2Q8NC56 503 aa20.93■□□□□ 0.94
SORT1-203ENST00000471996 E2F7Q96AV8 911 aa20.93■□□□□ 0.94
SORT1-203ENST00000471996 ZNF512Q96ME7 567 aaPredicted RBP20.93■□□□□ 0.94
SORT1-203ENST00000471996 LSM14BQ9BX40 385 aaKnown RBP20.93■□□□□ 0.94
SORT1-203ENST00000471996 C2orf40Q9H1Z8 148 aa20.93■□□□□ 0.94
SORT1-203ENST00000471996 GOLGA2P5Q9HBQ8 144 aa20.93■□□□□ 0.94
SORT1-203ENST00000471996 USP20Q9Y2K6 914 aa20.93■□□□□ 0.94
SORT1-203ENST00000471996 A0A087WWV3 80 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 ACKR2O00590 384 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 CHADO15335 359 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 EPN2O95208 641 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 PRKCBP05771 671 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 GJA1P17302 382 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 PSMA5P28066 241 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 HOXC13P31276 330 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 SOX9P48436 509 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 KPNA1P52294 538 aaPredicted RBP20.92■□□□□ 0.94
SORT1-203ENST00000471996 EPHA5P54756 1037 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 EEF1DP3Q658K8 133 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 TPGS2Q68CL5 300 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 YAF2Q8IY57 180 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 MCPH1Q8NEM0 835 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 GPR88Q9GZN0 384 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms