RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 MIIPQ5JXC2 388 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PPP4R3CPQ6ZMV5 832 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SLC30A1Q9Y6M5 507 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ASAP2O43150 1006 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PBLDP30039 288 aaPredicted RBP13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 KIF23Q02241 960 aaPredicted RBP13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SPTLC1O15269 473 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 AP2B1P63010 937 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ZRANB3Q5FWF4 1079 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 AGBL1Q96MI9 1066 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CARD9Q9H257 536 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PIH1D3Q9NQM4 214 aaKnown RBP13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 AGAP1Q9UPQ3 857 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TTLL13PA6NNM8 815 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PYGMP11217 842 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 RALBP11234 206 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ENO3P13929 434 aaPredicted RBP13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 AMHR2Q16671 573 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ASAP3Q8TDY4 903 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SCFD1Q8WVM8 642 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TGS1Q96RS0 853 aaKnown RBP13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 KIAA1586Q9HCI6 787 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 BIRC5O15392 142 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CTIFO43310 598 aaKnown RBP13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 OOSP2Q86WS3 158 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 APLFQ8IW19 511 aaPredicted RBP13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TSC22D3Q99576 134 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 MCM8Q9UJA3 840 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 F5H6K3 240 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PRPF3O43395 683 aaKnown RBP13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 RASSF9O75901 435 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 IL10P22301 178 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 KLRC3Q07444 240 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 IYDQ6PHW0 289 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 GAS2L3Q86XJ1 694 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 DCAF4Q8WV16 495 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 EXO5Q9H790 373 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ENTPD7Q9NQZ7 604 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 IP6K2Q9UHH9 426 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 WDR62O43379 1518 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 EMSYQ7Z589 1322 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CASP8Q14790 479 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 FAM136AQ96C01 138 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ACAD9Q9H845 621 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ABI2Q9NYB9 513 aaPredicted RBP13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 H0Y626 953 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TRIM16O95361 564 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 EIF3BP55884 814 aaKnown RBP13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ATPAF2Q8N5M1 289 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 MAP4K1Q92918 833 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 FOXP3Q9BZS1 431 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 JPH1Q9HDC5 661 aaPredicted RBP13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 EXOSC4Q9NPD3 245 aaKnown RBP13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ZNF711Q9Y462 761 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 KIF1BO60333 1816 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ESYT3A0FGR9 886 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TOMM70O94826 608 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 BFSP2Q13515 415 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TNIP3Q96KP6 325 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TBC1D22BQ9NU19 505 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PALLDQ8WX93 1383 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 NCAPHQ15003 741 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 RCN1Q15293 331 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TCEA2Q15560 299 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 STKLD1Q8NE28 680 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SPATA16Q9BXB7 569 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ITIH6Q6UXX5 1313 aa13.9□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PTPRN2Q92932 1015 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 BSDC1Q9NW68 430 aaPredicted RBP13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 NCK2O43639 380 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 ENO1P06733 434 aaKnown RBP13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 MLNP12872 115 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 PRCPP42785 496 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 MCAMP43121 646 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 UNC45BQ8IWX7 931 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 LINC00301Q8NCQ3 95 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 BRIP1Q9BX63 1249 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 NPHP3-ACAD11A0A0J9YXS1 232 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 R3HDM1Q15032 1099 aaKnown RBP13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 CNGA3Q16281 694 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 DCAF6Q58WW2 860 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 SMIM5Q71RC9 77 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 COMMD2Q86X83 199 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 CPA5Q8WXQ8 436 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 KLHL25Q9H0H3 589 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 GNASQ5JWF2 1037 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 EIF2AK1Q9BQI3 630 aaKnown RBP13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 C17orf80Q9BSJ5 609 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 ABCB6Q9NP58 842 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 FAM49BQ9NUQ9 324 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 PSD3Q9NYI0 1048 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 ATP1A1P05023 1023 aaKnown RBP13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 LTKP29376 864 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 COASYQ13057 564 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 DDX39BQ13838 428 aaKnown RBP13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 MIER2Q8N344 545 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 TMEM60Q9H2L4 133 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 A0A087X0T9 212 aa13.89□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 GRXCR2A6NFK2 248 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms