RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 BEST2Q8NFU1 509 aa27.31■■□□□ 1.96
COL15A1-203ENST00000471477 MICAL1Q8TDZ2 1067 aa27.31■■□□□ 1.96
COL15A1-203ENST00000471477 ZBP1Q9H171 429 aa27.31■■□□□ 1.96
COL15A1-203ENST00000471477 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.31■■□□□ 1.96
COL15A1-203ENST00000471477 COL6A3P12111 3177 aa27.3■■□□□ 1.96
COL15A1-203ENST00000471477 TMEM189-UBE2V1I3L0A0 370 aa27.3■■□□□ 1.96
COL15A1-203ENST00000471477 FSCN2O14926 492 aa27.3■■□□□ 1.96
COL15A1-203ENST00000471477 EFEMP2O95967 443 aa27.3■■□□□ 1.96
COL15A1-203ENST00000471477 NR2F2P24468 414 aa27.3■■□□□ 1.96
COL15A1-203ENST00000471477 RPL9P32969 192 aaKnown RBP27.3■■□□□ 1.96
COL15A1-203ENST00000471477 NFIL3Q16649 462 aa27.3■■□□□ 1.96
COL15A1-203ENST00000471477 CENPPQ6IPU0 288 aa27.3■■□□□ 1.96
COL15A1-203ENST00000471477 TMC7Q7Z402 723 aa27.3■■□□□ 1.96
COL15A1-203ENST00000471477 MAFAQ8NHW3 353 aaPredicted RBP27.3■■□□□ 1.96
COL15A1-203ENST00000471477 GPR62Q9BZJ7 368 aa27.3■■□□□ 1.96
COL15A1-203ENST00000471477 NSUN3Q9H649 340 aaKnown RBP27.3■■□□□ 1.96
COL15A1-203ENST00000471477 SOD2P04179 222 aa27.29■■□□□ 1.96
COL15A1-203ENST00000471477 LRPAP1P30533 357 aa27.29■■□□□ 1.96
COL15A1-203ENST00000471477 CASP4P49662 377 aa27.29■■□□□ 1.96
COL15A1-203ENST00000471477 CYP24A1Q07973 514 aa27.29■■□□□ 1.96
COL15A1-203ENST00000471477 MYBPC2Q14324 1141 aa27.29■■□□□ 1.96
COL15A1-203ENST00000471477 CCDC85BQ15834 202 aaPredicted RBP27.29■■□□□ 1.96
COL15A1-203ENST00000471477 CD300LGQ6UXG3 332 aa27.29■■□□□ 1.96
COL15A1-203ENST00000471477 NT5DC4Q86YG4 428 aa27.29■■□□□ 1.96
COL15A1-203ENST00000471477 RNF168Q8IYW5 571 aaPredicted RBP27.29■■□□□ 1.96
COL15A1-203ENST00000471477 HERC2P3Q9BVR0 1158 aa27.29■■□□□ 1.96
COL15A1-203ENST00000471477 STK39Q9UEW8 545 aa27.29■■□□□ 1.96
COL15A1-203ENST00000471477 SCN1AP35498 2009 aa27.29■■□□□ 1.96
COL15A1-203ENST00000471477 SF3B1O75533 1304 aaKnown RBP eCLIP27.28■■□□□ 1.96
COL15A1-203ENST00000471477 PSMA7O14818 248 aa27.28■■□□□ 1.96
COL15A1-203ENST00000471477 PPP1R2P41236 205 aa27.28■■□□□ 1.96
COL15A1-203ENST00000471477 PMS1P54277 932 aaKnown RBP27.28■■□□□ 1.96
COL15A1-203ENST00000471477 TFAMQ00059 246 aaKnown RBP27.28■■□□□ 1.96
COL15A1-203ENST00000471477 SURF1Q15526 300 aa27.28■■□□□ 1.96
COL15A1-203ENST00000471477 EDRF1Q3B7T1 1238 aa27.28■■□□□ 1.96
COL15A1-203ENST00000471477 CEP135Q66GS9 1140 aa27.28■■□□□ 1.96
COL15A1-203ENST00000471477 PDE12Q6L8Q7 609 aaKnown RBP27.28■■□□□ 1.96
COL15A1-203ENST00000471477 TAS1R1Q7RTX1 841 aa27.28■■□□□ 1.96
COL15A1-203ENST00000471477 AUTS2Q8WXX7 1259 aa27.28■■□□□ 1.96
COL15A1-203ENST00000471477 PPM1EQ8WY54 764 aa27.28■■□□□ 1.96
COL15A1-203ENST00000471477 FAM84AQ96KN4 292 aa27.28■■□□□ 1.96
COL15A1-203ENST00000471477 TRIM49BA6NDI0 452 aa27.27■■□□□ 1.96
COL15A1-203ENST00000471477 PPP1R3GB7ZBB8 358 aa27.27■■□□□ 1.96
COL15A1-203ENST00000471477 CTSAP10619 480 aa27.27■■□□□ 1.96
COL15A1-203ENST00000471477 PSMD6Q15008 389 aa27.27■■□□□ 1.96
COL15A1-203ENST00000471477 TCEAL5Q5H9L2 206 aa27.27■■□□□ 1.96
COL15A1-203ENST00000471477 LMBRD2Q68DH5 695 aaPredicted RBP27.27■■□□□ 1.96
COL15A1-203ENST00000471477 KLHL10Q6JEL2 608 aa27.27■■□□□ 1.96
COL15A1-203ENST00000471477 ADGRD2Q7Z7M1 963 aa27.27■■□□□ 1.96
COL15A1-203ENST00000471477 DHTKD1Q96HY7 919 aaPredicted RBP27.27■■□□□ 1.96
COL15A1-203ENST00000471477 MFSD14AQ96MC6 490 aa27.27■■□□□ 1.96
COL15A1-203ENST00000471477 TSG101Q99816 390 aa27.27■■□□□ 1.96
COL15A1-203ENST00000471477 NGRNQ9NPE2 291 aaKnown RBP27.27■■□□□ 1.96
COL15A1-203ENST00000471477 DPP3Q9NY33 737 aa27.27■■□□□ 1.96
COL15A1-203ENST00000471477 PTPRJQ12913 1337 aa27.27■■□□□ 1.96
COL15A1-203ENST00000471477 CCNE1P24864 410 aa27.26■■□□□ 1.95
COL15A1-203ENST00000471477 RPL13P26373 211 aaKnown RBP27.26■■□□□ 1.95
COL15A1-203ENST00000471477 CA8P35219 290 aa27.26■■□□□ 1.95
COL15A1-203ENST00000471477 BRCC3P46736 316 aa27.26■■□□□ 1.95
COL15A1-203ENST00000471477 SMC1AQ14683 1233 aaKnown RBP27.26■■□□□ 1.95
COL15A1-203ENST00000471477 ANKRD40Q6AI12 368 aa27.26■■□□□ 1.95
COL15A1-203ENST00000471477 CCDC127Q96BQ5 260 aa27.26■■□□□ 1.95
COL15A1-203ENST00000471477 B3GALT6Q96L58 329 aa27.26■■□□□ 1.95
COL15A1-203ENST00000471477 FRMD4BQ9Y2L6 1034 aa27.26■■□□□ 1.95
COL15A1-203ENST00000471477 HIDE1A8MVS5 230 aa27.25■■□□□ 1.95
COL15A1-203ENST00000471477 PPEF2O14830 753 aa27.25■■□□□ 1.95
COL15A1-203ENST00000471477 DLATP10515 647 aaKnown RBP27.25■■□□□ 1.95
COL15A1-203ENST00000471477 ADAM9Q13443 819 aa27.25■■□□□ 1.95
COL15A1-203ENST00000471477 BMS1Q14692 1282 aaKnown RBP27.25■■□□□ 1.95
COL15A1-203ENST00000471477 C9orf57Q5W0N0 161 aa27.25■■□□□ 1.95
COL15A1-203ENST00000471477 CACTINQ8WUQ7 758 aaKnown RBP27.25■■□□□ 1.95
COL15A1-203ENST00000471477 FNBP1Q96RU3 617 aa27.25■■□□□ 1.95
COL15A1-203ENST00000471477 MTMR12Q9C0I1 747 aa27.25■■□□□ 1.95
COL15A1-203ENST00000471477 CTNND2Q9UQB3 1225 aa27.25■■□□□ 1.95
COL15A1-203ENST00000471477 NUB1Q9Y5A7 615 aa27.25■■□□□ 1.95
COL15A1-203ENST00000471477 PRUNE2Q8WUY3 3088 aa27.25■■□□□ 1.95
COL15A1-203ENST00000471477 I3L4J1 428 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 CXCL14O95715 111 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 URODP06132 367 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 TMEM191BP0C7N4 346 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 LRRC63Q05C16 580 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 ELAVL2Q12926 359 aaKnown RBP27.24■■□□□ 1.95
COL15A1-203ENST00000471477 USP41Q3LFD5 358 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 FAM171A1Q5VUB5 890 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 WDR49Q8IV35 697 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 PLEKHO2Q8TD55 490 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 NELFBQ8WX92 580 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 EEF2KMTQ96G04 330 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 CGRRF1Q99675 332 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 GZF1Q9H116 711 aaPredicted RBP27.24■■□□□ 1.95
COL15A1-203ENST00000471477 INTS13Q9NVM9 706 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.24■■□□□ 1.95
COL15A1-203ENST00000471477 ANO9A1A5B4 782 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 C2CD2LO14523 706 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 AKAP3O75969 853 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 GLUD2P49448 558 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 PTPN14Q15678 1187 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 MRPL43Q8N983 215 aaKnown RBP27.24■■□□□ 1.95
COL15A1-203ENST00000471477 C1orf127Q8N9H9 656 aa27.24■■□□□ 1.95
COL15A1-203ENST00000471477 OR5B17Q8NGF7 314 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms