RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 PARVGQ9HBI0 331 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 HCFC1R1Q9NWW0 138 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 TBX20Q9UMR3 447 aa16.77■□□□□ 0.28
COL1A1-203ENST00000471344 DMDP11532 3685 aa16.77■□□□□ 0.27
COL1A1-203ENST00000471344 NOTCH4Q99466 2003 aa16.77■□□□□ 0.27
COL1A1-203ENST00000471344 VPS13AQ96RL7 3174 aa16.77■□□□□ 0.27
COL1A1-203ENST00000471344 MYH15Q9Y2K3 1946 aa16.76■□□□□ 0.27
COL1A1-203ENST00000471344 KRT18P05783 430 aaKnown RBP16.76■□□□□ 0.27
COL1A1-203ENST00000471344 PDCP20941 246 aa16.76■□□□□ 0.27
COL1A1-203ENST00000471344 AVPR2P30518 371 aa16.76■□□□□ 0.27
COL1A1-203ENST00000471344 LIG4P49917 911 aa16.76■□□□□ 0.27
COL1A1-203ENST00000471344 TDGQ13569 410 aa16.76■□□□□ 0.27
COL1A1-203ENST00000471344 ZC2HC1CQ53FD0 456 aaPredicted RBP16.76■□□□□ 0.27
COL1A1-203ENST00000471344 PPM1LQ5SGD2 360 aa16.76■□□□□ 0.27
COL1A1-203ENST00000471344 VARS2Q5ST30 1063 aaKnown RBP16.76■□□□□ 0.27
COL1A1-203ENST00000471344 AXDND1Q5T1B0 1012 aaPredicted RBP16.76■□□□□ 0.27
COL1A1-203ENST00000471344 LIN9Q5TKA1 542 aa16.76■□□□□ 0.27
COL1A1-203ENST00000471344 ALYREFQ86V81 257 aaKnown RBP16.76■□□□□ 0.27
COL1A1-203ENST00000471344 TMEM105Q8N8V8 129 aa16.76■□□□□ 0.27
COL1A1-203ENST00000471344 CCSER1Q9C0I3 900 aa16.76■□□□□ 0.27
COL1A1-203ENST00000471344 KCNH6Q9H252 994 aa16.76■□□□□ 0.27
COL1A1-203ENST00000471344 EPS15L1Q9UBC2 864 aa16.76■□□□□ 0.27
COL1A1-203ENST00000471344 DUSP12Q9UNI6 340 aa16.76■□□□□ 0.27
COL1A1-203ENST00000471344 A0A087X0B3 334 aa16.75■□□□□ 0.27
COL1A1-203ENST00000471344 TTC26A0AVF1 554 aa16.75■□□□□ 0.27
COL1A1-203ENST00000471344 K7ELQ4 463 aaPredicted RBP16.75■□□□□ 0.27
COL1A1-203ENST00000471344 HNRNPDLO14979 420 aaKnown RBP16.75■□□□□ 0.27
COL1A1-203ENST00000471344 TRAK2O60296 914 aa16.75■□□□□ 0.27
COL1A1-203ENST00000471344 ROR1Q01973 937 aa16.75■□□□□ 0.27
COL1A1-203ENST00000471344 ENOX2Q16206 610 aaKnown RBP16.75■□□□□ 0.27
COL1A1-203ENST00000471344 CWF19L1Q69YN2 538 aaKnown RBP16.75■□□□□ 0.27
COL1A1-203ENST00000471344 PDXDC1Q6P996 788 aa16.75■□□□□ 0.27
COL1A1-203ENST00000471344 DYMQ7RTS9 669 aa16.75■□□□□ 0.27
COL1A1-203ENST00000471344 ITFG1Q8TB96 612 aa16.75■□□□□ 0.27
COL1A1-203ENST00000471344 STAMQ92783 540 aa16.75■□□□□ 0.27
COL1A1-203ENST00000471344 USP28Q96RU2 1077 aa16.75■□□□□ 0.27
COL1A1-203ENST00000471344 POLIQ9UNA4 740 aa16.75■□□□□ 0.27
COL1A1-203ENST00000471344 SRPRBQ9Y5M8 271 aaKnown RBP16.75■□□□□ 0.27
COL1A1-203ENST00000471344 BACE2Q9Y5Z0 518 aa16.75■□□□□ 0.27
COL1A1-203ENST00000471344 COL4A3Q01955 1670 aa16.75■□□□□ 0.27
COL1A1-203ENST00000471344 ANK1P16157 1881 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 WDR27A2RRH5 827 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 LACTBL1A8MY62 500 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 ANKRD63C9JTQ0 380 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 PPEF2O14830 753 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 TRAPPC3O43617 180 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 TBCAO75347 108 aaKnown RBP16.74■□□□□ 0.27
COL1A1-203ENST00000471344 PIGRP01833 764 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 CLTAP09496 248 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 LAMP2P13473 410 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 FSHRP23945 695 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 ARPP19P56211 112 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 ANKS3Q6ZW76 656 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 SFR1Q86XK3 245 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 KCNN1Q92952 543 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 KIF12Q96FN5 646 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 INTS4Q96HW7 963 aaKnown RBP16.74■□□□□ 0.27
COL1A1-203ENST00000471344 RPP25Q9BUL9 199 aaKnown RBP16.74■□□□□ 0.27
COL1A1-203ENST00000471344 FAM86C1Q9NVL1 165 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 NUB1Q9Y5A7 615 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 PIEZO1Q92508 2521 aa16.74■□□□□ 0.27
COL1A1-203ENST00000471344 MYMKA6NI61 221 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 H0YCG3 227 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 TBC1D4O60343 1298 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 CFHP08603 1231 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 HNRNPA1P09651 372 aaKnown RBP eCLIP16.73■□□□□ 0.27
COL1A1-203ENST00000471344 NPR3P17342 541 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 HOXA9P31269 272 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 RPL9P32969 192 aaKnown RBP16.73■□□□□ 0.27
COL1A1-203ENST00000471344 MCM4P33991 863 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 DDIT3P35638 169 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 HTR4Q13639 388 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 SLC8B1Q6J4K2 584 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 MAP4K3Q8IVH8 894 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 SIX5Q8N196 739 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 SLC44A3Q8N4M1 653 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 SUSD3Q96L08 255 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 IGSF9Q9P2J2 1179 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 DNMT3BQ9UBC3 853 aaKnown RBP16.73■□□□□ 0.27
COL1A1-203ENST00000471344 KCNG1Q9UIX4 513 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 TIMM13Q9Y5L4 95 aaPredicted RBP16.73■□□□□ 0.27
COL1A1-203ENST00000471344 NUMBLQ9Y6R0 609 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 TSC2P49815 1807 aa16.73■□□□□ 0.27
COL1A1-203ENST00000471344 A0A0B4J269 797 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 NRG2O14511 850 aaPredicted RBP16.72■□□□□ 0.27
COL1A1-203ENST00000471344 OGTO15294 1046 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 STX6O43752 255 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 SEC24AO95486 1093 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 MRE11P49959 708 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 GTF2BQ00403 316 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 PPP2R3AQ06190 1150 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 MRPL58Q14197 206 aaKnown RBP16.72■□□□□ 0.27
COL1A1-203ENST00000471344 ZBTB6Q15916 424 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 POTEHQ6S545 545 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 PARM1Q6UWI2 310 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 FLCNQ8NFG4 579 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 ING5Q8WYH8 240 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 FGF14Q92915 247 aa16.72■□□□□ 0.27
COL1A1-203ENST00000471344 FAM212AQ96EL1 285 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms