RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 CLTBP09497 229 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 SKILP12757 684 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 ITGA4P13612 1032 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 ATF7P17544 494 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-233ENST00000470710 CYP3A5P20815 502 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 AKAP5P24588 427 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 ATICP31939 592 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 KCNJ6P48051 423 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 MFAP3P55082 362 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 NOP14P78316 857 aaKnown RBP9.38□□□□□ -0.91
HDLBP-233ENST00000470710 FAM189BP81408 668 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 TRPC3Q13507 836 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 SGSM1Q2NKQ1 1148 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 SFMBT2Q5VUG0 894 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 GJB7Q6PEY0 223 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 POTEHQ6S545 545 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 CYP26C1Q6V0L0 522 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 SLC24A5Q71RS6 500 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 ZNF598Q86UK7 904 aaKnown RBP9.38□□□□□ -0.91
HDLBP-233ENST00000470710 TMTC1Q8IUR5 882 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 ARHGEF19Q8IW93 802 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 C1orf127Q8N9H9 656 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 BEST2Q8NFU1 509 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 CXorf38Q8TB03 319 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 HELQQ8TDG4 1101 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 SEPT8Q92599 483 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 TAF4BQ92750 862 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 PGBD4Q96DM1 585 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 KIF12Q96FN5 646 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 ZNF830Q96NB3 372 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-233ENST00000470710 ZMAT2Q96NC0 199 aaKnown RBP9.38□□□□□ -0.91
HDLBP-233ENST00000470710 SPAG5Q96R06 1193 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 APOL6Q9BWW8 343 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 IMPG2Q9BZV3 1241 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 XYLT2Q9H1B5 865 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 WNT8AQ9H1J5 351 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 VRTNQ9H8Y1 702 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 UBE2TQ9NPD8 197 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-233ENST00000470710 UBN1Q9NPG3 1134 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 NLRC4Q9NPP4 1024 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 RGS18Q9NS28 235 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 C1orf112Q9NSG2 853 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 AIPL1Q9NZN9 384 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 PARP2Q9UGN5 583 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 SIX4Q9UIU6 781 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 DNAJC12Q9UKB3 198 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 AJAP1Q9UKB5 411 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-233ENST00000470710 UBQLN1Q9UMX0 589 aaKnown RBP9.38□□□□□ -0.91
HDLBP-233ENST00000470710 ATP11BQ9Y2G3 1177 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 ZKSCAN5Q9Y2L8 839 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 UMODL1Q5DID0 1318 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 SMIM28A0A1B0GU29 152 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 F8VZ95 297 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 KIAA0355O15063 1070 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 INPPL1O15357 1258 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 STAU1O95793 577 aaKnown RBP9.37□□□□□ -0.91
HDLBP-233ENST00000470710 EOMESO95936 686 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 TBXAS1P24557 533 aaPredicted RBP9.37□□□□□ -0.91
HDLBP-233ENST00000470710 RFC2P35250 354 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 SOX5P35711 763 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 STAT1P42224 750 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 RBP5P82980 135 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 RAPGEF1Q13905 1077 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 DRAP1Q14919 205 aaPredicted RBP9.37□□□□□ -0.91
HDLBP-233ENST00000470710 E4F1Q66K89 784 aaPredicted RBP9.37□□□□□ -0.91
HDLBP-233ENST00000470710 WDR59Q6PJI9 974 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 AGMOQ6ZNB7 445 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 RTN4RL1Q86UN2 441 aaPredicted RBP9.37□□□□□ -0.91
HDLBP-233ENST00000470710 ECHDC2Q86YB7 292 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 PPM1KQ8N3J5 372 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 LINC01599Q8WXQ3 324 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 SHC3Q92529 594 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 TATDN2Q93075 761 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 JAKMIP2Q96AA8 810 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 KREMEN1Q96MU8 473 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 PPP1R10Q96QC0 940 aaKnown RBP9.37□□□□□ -0.91
HDLBP-233ENST00000470710 PI4K2AQ9BTU6 479 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 GPR88Q9GZN0 384 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 APOBEC3GQ9HC16 384 aaKnown RBP9.37□□□□□ -0.91
HDLBP-233ENST00000470710 TMEM39AQ9NV64 488 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 SLC38A7Q9NVC3 462 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 DPP3Q9NY33 737 aa9.37□□□□□ -0.91
HDLBP-233ENST00000470710 SSU72P8A0A1W2PR75 194 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 ANO9A1A5B4 782 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 ARL5CA6NH57 179 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 PTGESO14684 152 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 CST3P01034 146 aaPredicted RBP9.36□□□□□ -0.91
HDLBP-233ENST00000470710 ITGB3P05106 788 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 SERPING1P05155 500 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 CCDC172P0C7W6 258 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 FERP16591 822 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 EN2P19622 333 aaPredicted RBP9.36□□□□□ -0.91
HDLBP-233ENST00000470710 ANXA13P27216 316 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 POLR2BP30876 1174 aaKnown RBP9.36□□□□□ -0.91
HDLBP-233ENST00000470710 CYP2C18P33260 490 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 PRKCIP41743 596 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 MYL6P60660 151 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 CUL2Q13617 745 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 ASIC2Q16515 512 aa9.36□□□□□ -0.91
HDLBP-233ENST00000470710 ZNF699Q32M78 642 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms