RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 RIMS2Q9UQ26 1411 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 ALG1L2C9J202 215 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 APOL3O95236 402 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 MYBL2P10244 700 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 ZNF37AP17032 561 aaPredicted RBP3.48□□□□□ -1.85
UBXN4-206ENST00000470687 MEOX1P50221 254 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 NEK2P51955 445 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 KRT85P78386 507 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 MRPS9P82933 396 aaKnown RBP3.48□□□□□ -1.85
UBXN4-206ENST00000470687 CDK17Q00537 523 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 RIN1Q13671 783 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 UBE3CQ15386 1083 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.48□□□□□ -1.85
UBXN4-206ENST00000470687 C3orf36Q3SXR2 165 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 C1QL3Q5VWW1 255 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 ZZZ3Q8IYH5 903 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 CPA6Q8N4T0 437 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 C7orf31Q8N865 590 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 GAB3Q8WWW8 586 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 HAS1Q92839 578 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 CDH19Q9H159 772 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 SLC12A5Q9H2X9 1139 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 TCF7L1Q9HCS4 588 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 PACSIN3Q9UKS6 424 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 USP18Q9UMW8 372 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 PCDHB6Q9Y5E3 794 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 CROCC2H7BZ55 1655 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 PIK3C2BO00750 1634 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 CHD2O14647 1828 aaKnown RBP3.47□□□□□ -1.85
UBXN4-206ENST00000470687 GCC2Q8IWJ2 1684 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 ZAR1LA6NP61 321 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 AMY1AP04745 511 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 APPP05067 770 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 CTSSP25774 331 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 MCAMP43121 646 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 ATP2C1P98194 919 aaPredicted RBP3.47□□□□□ -1.85
UBXN4-206ENST00000470687 OCRLQ01968 901 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 PPARAQ07869 468 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 CNGB1Q14028 1251 aaPredicted RBP3.47□□□□□ -1.85
UBXN4-206ENST00000470687 PTPN21Q16825 1174 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 UGT8Q16880 541 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 MEX3CQ5U5Q3 659 aaKnown RBP3.47□□□□□ -1.85
UBXN4-206ENST00000470687 PAPD7Q5XG87 772 aaKnown RBP3.47□□□□□ -1.85
UBXN4-206ENST00000470687 METRNLQ641Q3 311 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
UBXN4-206ENST00000470687 RHOUQ7L0Q8 258 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 OTOP2Q7RTS6 562 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 VRK3Q8IV63 474 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 TPH2Q8IWU9 490 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 RTKN2Q8IZC4 609 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 PRR18Q8N4B5 295 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 ZGPATQ8N5A5 531 aaKnown RBP3.47□□□□□ -1.85
UBXN4-206ENST00000470687 DCBLD1Q8N8Z6 715 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 REPS2Q8NFH8 660 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 DPF2Q92785 391 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 LENG9Q96B70 501 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 COA7Q96BR5 231 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 NOL10Q9BSC4 688 aaKnown RBP3.47□□□□□ -1.85
UBXN4-206ENST00000470687 VSX1Q9NZR4 365 aaPredicted RBP3.47□□□□□ -1.85
UBXN4-206ENST00000470687 RGS17Q9UGC6 210 aaPredicted RBP3.47□□□□□ -1.85
UBXN4-206ENST00000470687 ZBTB21Q9ULJ3 1066 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 G3BP2Q9UN86 482 aaKnown RBP3.47□□□□□ -1.85
UBXN4-206ENST00000470687 GPR45Q9Y5Y3 372 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 ADGRB3O60242 1522 aa3.47□□□□□ -1.85
UBXN4-206ENST00000470687 CDK12Q9NYV4 1490 aaPredicted RBP3.47□□□□□ -1.85
UBXN4-206ENST00000470687 NWD1Q149M9 1564 aa3.46□□□□□ -1.85
UBXN4-206ENST00000470687 PNPLA7Q6ZV29 1317 aa3.46□□□□□ -1.85
UBXN4-206ENST00000470687 HFM1A2PYH4 1435 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 SETD5Q9C0A6 1442 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 TRPM2O94759 1503 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 TMEM131LA2VDJ0 1609 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 CCDC78A2IDD5 438 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 GRID2IPA4D2P6 1211 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 HTRA2O43464 458 aaPredicted RBP3.46□□□□□ -1.86
UBXN4-206ENST00000470687 NDUFS2O75306 463 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 FPR1P21462 350 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 MAN2A2P49641 1150 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 BCAR1P56945 870 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 RBM6P78332 1123 aaKnown RBP3.46□□□□□ -1.86
UBXN4-206ENST00000470687 ATP8B2P98198 1209 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 IL10RAQ13651 578 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 DGKDQ16760 1214 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 BTNL9Q6UXG8 535 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 EPM2AIP1Q7L775 607 aaPredicted RBP3.46□□□□□ -1.86
UBXN4-206ENST00000470687 NME9Q86XW9 330 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 ADGRG3Q86Y34 549 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 GLB1L3Q8NCI6 653 aaPredicted RBP3.46□□□□□ -1.86
UBXN4-206ENST00000470687 SLC25A43Q8WUT9 341 aaPredicted RBP3.46□□□□□ -1.86
UBXN4-206ENST00000470687 RAB24Q969Q5 203 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 MIEF2Q96C03 454 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 CEP95Q96GE4 821 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 DYDC2Q96IM9 177 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 ACAP3Q96P50 834 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 LRFN3Q9BTN0 628 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 MLST8Q9BVC4 326 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 OSBPL6Q9BZF3 934 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 IFT122Q9HBG6 1241 aa3.46□□□□□ -1.86
UBXN4-206ENST00000470687 METTL14Q9HCE5 456 aaKnown RBP3.46□□□□□ -1.86
UBXN4-206ENST00000470687 POLR3BQ9NW08 1133 aaPredicted RBP3.46□□□□□ -1.86
UBXN4-206ENST00000470687 TRPS1Q9UHF7 1281 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms