RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 CALCOCO1Q9P1Z2 691 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 PNMA8BQ9ULN7 279 aaPredicted RBP7.11□□□□□ -1.27
SSB-209ENST00000470621 PCDHA3Q9Y5H8 950 aa7.11□□□□□ -1.27
SSB-209ENST00000470621 AATKQ6ZMQ8 1374 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 NT5C1B-RDH14C9J2C7 533 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 RFPL1O75677 317 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 RECQL4O94761 1208 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 FTLP02792 175 aaPredicted RBP7.1□□□□□ -1.27
SSB-209ENST00000470621 TACR2P21452 398 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 NOMO3P69849 1222 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 NOGQ13253 232 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 PABPC1LQ4VXU2 614 aaKnown RBP7.1□□□□□ -1.27
SSB-209ENST00000470621 NOMO2Q5JPE7 1267 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 LRRC55Q6ZSA7 311 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 EPM2AIP1Q7L775 607 aaPredicted RBP7.1□□□□□ -1.27
SSB-209ENST00000470621 RHOT2Q8IXI1 618 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 SLC25A43Q8WUT9 341 aaPredicted RBP7.1□□□□□ -1.27
SSB-209ENST00000470621 FAM193BQ96PV7 902 aaPredicted RBP7.1□□□□□ -1.27
SSB-209ENST00000470621 CAMKK2Q96RR4 588 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 DCLRE1CQ96SD1 692 aaKnown RBP7.1□□□□□ -1.27
SSB-209ENST00000470621 MMRN2Q9H8L6 949 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 KLHL11Q9NVR0 708 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 SRRDQ9UH36 339 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 SLC45A2Q9UMX9 530 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 MAP3K2Q9Y2U5 619 aa7.1□□□□□ -1.27
SSB-209ENST00000470621 F2RL2O00254 374 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 AP1G1O43747 822 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 NARSO43776 548 aaKnown RBP7.09□□□□□ -1.27
SSB-209ENST00000470621 HAUS5O94927 633 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 ALDH2P05091 517 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 ELANEP08246 267 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 VCAM1P19320 739 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 LPOP22079 712 aaPredicted RBP7.09□□□□□ -1.27
SSB-209ENST00000470621 GCSHP23434 173 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 SLFN5Q08AF3 891 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 PPP2R5AQ15172 486 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 TSHZ3Q63HK5 1081 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 SLC4A10Q6U841 1118 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 B3GNT9Q6UX72 402 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 SLC46A2Q9BY10 475 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 KRTAP9-8Q9BYQ0 159 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 USP25Q9UHP3 1055 aa7.09□□□□□ -1.27
SSB-209ENST00000470621 LPXNO60711 386 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 OFD1O75665 1012 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 ZNF202O95125 648 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 MYBP10242 640 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 ALAS1P13196 640 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 CYP2C19P33261 490 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 OCA2Q04671 838 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 ATP2B3Q16720 1220 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 SLC16A11Q8NCK7 471 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 C3orf20Q8ND61 904 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 TBC1D15Q8TC07 691 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 DIS3LQ8TF46 1054 aaKnown RBP7.08□□□□□ -1.28
SSB-209ENST00000470621 TSR2Q969E8 191 aaKnown RBP7.08□□□□□ -1.28
SSB-209ENST00000470621 AIFM3Q96NN9 605 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 MAP3K14Q99558 947 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 MLST8Q9BVC4 326 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 C1orf43Q9BWL3 253 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 NRDE2Q9H7Z3 1164 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 NMRK2Q9NPI5 230 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 AKIP1Q9NQ31 210 aa7.08□□□□□ -1.28
SSB-209ENST00000470621 REXO2Q9Y3B8 237 aaKnown RBP7.08□□□□□ -1.28
SSB-209ENST00000470621 DIRC3C9JPN6 131 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 RPLP2P05387 115 aaKnown RBP7.07□□□□□ -1.28
SSB-209ENST00000470621 HK3P52790 923 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 BEAN1Q3B7T3 259 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 CHPFQ8IZ52 775 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 SH2D3CQ8N5H7 860 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 FITM2Q8N6M3 262 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 IL17RDQ8NFM7 739 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 PPP1R35Q8TAP8 253 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 ZNF483Q8TF39 744 aaPredicted RBP7.07□□□□□ -1.28
SSB-209ENST00000470621 MARS2Q96GW9 593 aaKnown RBP7.07□□□□□ -1.28
SSB-209ENST00000470621 TAAR9Q96RI9 348 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 TLR10Q9BXR5 811 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 SCAND2PQ9GZW5 306 aaPredicted RBP7.07□□□□□ -1.28
SSB-209ENST00000470621 HSFX1Q9UBD0 423 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 ABCF2Q9UG63 623 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 ATP11BQ9Y2G3 1177 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 NR2E3Q9Y5X4 410 aa7.07□□□□□ -1.28
SSB-209ENST00000470621 A0A1B0GTW7 788 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 MARCH11A6NNE9 402 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 TSPAN6O43657 245 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 AGFG2O95081 481 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 FSHBP01225 129 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 MTHFD1P11586 935 aaKnown RBP7.06□□□□□ -1.28
SSB-209ENST00000470621 FCER1AP12319 257 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 FGFR4P22455 802 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 HSD11B2P80365 405 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 FAM102BQ5T8I3 360 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 UTP14CQ5TAP6 766 aaKnown RBP7.06□□□□□ -1.28
SSB-209ENST00000470621 B3GNTL1Q67FW5 361 aaPredicted RBP7.06□□□□□ -1.28
SSB-209ENST00000470621 RHOUQ7L0Q8 258 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 HEATR3Q7Z4Q2 680 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 MRGPREQ86SM8 312 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 MAPKAPK5Q8IW41 473 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 TMIEQ8NEW7 156 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 CLIP3Q96DZ5 547 aa7.06□□□□□ -1.28
SSB-209ENST00000470621 CGRRF1Q99675 332 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms