RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, human

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-227	ENST00000470563	AFF4	Q9UHB7	1163 aa	Known RBP	6.59	□□□□□ -1.35
RBM39-227	ENST00000470563	BICRA	Q9NZM4	1560 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	TRIM43B	A6NCK2	446 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	FGA	P02671	866 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	SNRPA1	P09661	255 aa	Known RBP	6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	TAL1	P17542	331 aa	Predicted RBP	6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	TNFSF4	P23510	183 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	SLC7A1	P30825	629 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	APBA1	Q02410	837 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	FSTL1	Q12841	308 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	CHAF1A	Q13111	956 aa	Predicted RBP	6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	C1orf228	Q6PIY5	440 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	GPR155	Q7Z3F1	870 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	SESTD1	Q86VW0	696 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	COL23A1	Q86Y22	540 aa	Predicted RBP	6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	MYLK4	Q86YV6	388 aa	Predicted RBP	6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	TRIM43	Q96BQ3	446 aa	Predicted RBP	6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	APOL5	Q9BWW9	433 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	ADAM7	Q9H2U9	754 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	KCNK12	Q9HB15	430 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	SERHL	Q9NQF3	203 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	JKAMP	Q9P055	326 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	OGDHL	Q9ULD0	1010 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	CNOT6	Q9ULM6	557 aa	Known RBP	6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	RUSC2	Q8N2Y8	1516 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	CFAP43	Q8NDM7	1665 aa		6.58	□□□□□ -1.36
RBM39-227	ENST00000470563	USP19	O94966	1318 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	CLCA1	A8K7I4	914 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	AMH	P03971	560 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	CD1A	P06126	327 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	FPR1	P21462	350 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	STT3A	P46977	705 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	ALDH1A3	P47895	512 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	HTRA4	P83105	476 aa	Predicted RBP	6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	ATP2C1	P98194	919 aa	Predicted RBP	6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	TNFAIP2	Q03169	654 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	KIAA2012	Q0VF49	1180 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	HABP2	Q14520	560 aa	Predicted RBP	6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	ZNF568	Q3ZCX4	644 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	KHDC1L	Q5JSQ8	128 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	MFSD14B	Q5SR56	506 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	SYDE1	Q6ZW31	735 aa	Predicted RBP	6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	ANKRD53	Q8N9V6	530 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	ARL8A	Q96BM9	186 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	TMEM41A	Q96HV5	264 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	NDC1	Q9BTX1	674 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	NELFA	Q9H3P2	528 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	ARMT1	Q9H993	441 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	GPR35	Q9HC97	309 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	IL23A	Q9NPF7	189 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	CFAP97	Q9P2B7	532 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	CLCA2	Q9UQC9	943 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	ACTL7A	Q9Y615	435 aa		6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	DHX57	Q6P158	1386 aa	Known RBP	6.57	□□□□□ -1.36
RBM39-227	ENST00000470563	TCAF2	A6NFQ2	919 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	MROH6	A6NGR9	719 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	MATN2	O00339	956 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	SASH1	O94885	1247 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	FARP2	O94887	1054 aa	Predicted RBP	6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	ALAS1	P13196	640 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	PTPN7	P35236	360 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	PPM1A	P35813	382 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	IL6ST	P40189	918 aa	Predicted RBP	6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	SOX8	P57073	446 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	FAM209B	Q5JX69	171 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	AFMID	Q63HM1	303 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	KRT40	Q6A162	431 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	ZNF365	Q70YC5	407 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	GPRIN1	Q7Z2K8	1008 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	PLEKHH3	Q7Z736	793 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	TP53I13	Q8NBR0	393 aa	Predicted RBP	6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	REPS2	Q8NFH8	660 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	SMURF2	Q9HAU4	748 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	GPRC5B	Q9NZH0	403 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	COL20A1	Q9P218	1284 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	MYO1A	Q9UBC5	1043 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	SLC23A1	Q9UHI7	598 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	PGAP2	Q9UHJ9	254 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	FAM184B	Q9ULE4	1060 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	SMG5	Q9UPR3	1016 aa	Known RBP	6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	LRCH1	Q9Y2L9	728 aa		6.56	□□□□□ -1.36
RBM39-227	ENST00000470563	PRX	Q9BXM0	1461 aa		6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	MBD3L4	A6NDZ8	208 aa	Predicted RBP	6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	MBD3L3	A6NE82	208 aa	Predicted RBP	6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	PRSS29P	A6NIE9	313 aa		6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	CXorf49	A8MYA2	514 aa	Predicted RBP	6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	WNT10B	O00744	389 aa		6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	ADAMTS3	O15072	1205 aa		6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	GRM6	O15303	877 aa		6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	ABHD16A	O95870	558 aa		6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	CHEK2	O96017	543 aa		6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	GNAI3	P08754	354 aa		6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	BRAF	P15056	766 aa		6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	ATP5J	P18859	108 aa		6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	CASR	P41180	1078 aa		6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	NPEPPS	P55786	919 aa		6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	SUMO3	P55854	103 aa	Predicted RBP	6.55	□□□□□ -1.36
RBM39-227	ENST00000470563	GNAI1	P63096	354 aa		6.55	□□□□□ -1.36

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