RNA–Protein interactions for RNA: ENST00000470482.5

HDLBP-232, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-232ENST00000470482 USP28Q96RU2 1077 aa12.82□□□□□ -0.36
HDLBP-232ENST00000470482 SLC38A7Q9NVC3 462 aa12.82□□□□□ -0.36
HDLBP-232ENST00000470482 IGSF9Q9P2J2 1179 aa12.82□□□□□ -0.36
HDLBP-232ENST00000470482 USP34Q70CQ2 3546 aa12.82□□□□□ -0.36
HDLBP-232ENST00000470482 ARHGEF37A1IGU5 675 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 FRMD3A2A2Y4 597 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 H0YCG3 227 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 I3L4J1 428 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 M0QZQ0 153 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 SYN3O14994 580 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 CLDN3O15551 220 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 TRAK2O60296 914 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 MYBP10242 640 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 CYP3A5P20815 502 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 MARCKSP29966 332 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-232ENST00000470482 TDGQ13569 410 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 HTR4Q13639 388 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 ENOX2Q16206 610 aaKnown RBP12.81□□□□□ -0.36
HDLBP-232ENST00000470482 SPECC1Q5M775 1068 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 ANKS3Q6ZW76 656 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 ZNF720Q7Z2F6 126 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 CEP57Q86XR8 500 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 MAP4K3Q8IVH8 894 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 GLYCTKQ8IVS8 523 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 SLC44A3Q8N4M1 653 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 ZNF461Q8TAF7 563 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 LARP4BQ92615 738 aaKnown RBP12.81□□□□□ -0.36
HDLBP-232ENST00000470482 NXPE3Q969Y0 559 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 ACSF2Q96CM8 615 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-232ENST00000470482 CALML4Q96GE6 196 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 CLIC6Q96NY7 704 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 TSPAN18Q96SJ8 248 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 PARVGQ9HBI0 331 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 AVENQ9NQS1 362 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-232ENST00000470482 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.81□□□□□ -0.36
HDLBP-232ENST00000470482 CPSF3Q9UKF6 684 aaKnown RBP12.81□□□□□ -0.36
HDLBP-232ENST00000470482 DUSP12Q9UNI6 340 aa12.81□□□□□ -0.36
HDLBP-232ENST00000470482 RIF1Q5UIP0 2472 aaKnown RBP12.81□□□□□ -0.36
HDLBP-232ENST00000470482 MYMKA6NI61 221 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 LACTBL1A8MY62 500 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 ANKRD63C9JTQ0 380 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 K7ELQ4 463 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-232ENST00000470482 TRAPPC3O43617 180 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 OAZ2O95190 189 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 VNN2O95498 520 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 CXCL8P10145 99 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 NMT1P30419 496 aaKnown RBP12.8□□□□□ -0.36
HDLBP-232ENST00000470482 ADSSP30520 456 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 NUBP1P53384 320 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 YARSP54577 528 aaKnown RBP12.8□□□□□ -0.36
HDLBP-232ENST00000470482 NTHL1P78549 312 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 POU5F1Q01860 360 aaKnown RBP12.8□□□□□ -0.36
HDLBP-232ENST00000470482 STRN3Q13033 797 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 TMEM132AQ24JP5 1023 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
HDLBP-232ENST00000470482 AXDND1Q5T1B0 1012 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-232ENST00000470482 CRELD2Q6UXH1 353 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-232ENST00000470482 TMEM105Q8N8V8 129 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 BEST2Q8NFU1 509 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 RSAD2Q8WXG1 361 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 TCHPQ9BT92 498 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 RPP25Q9BUL9 199 aaKnown RBP12.8□□□□□ -0.36
HDLBP-232ENST00000470482 IKZF4Q9H2S9 585 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 DNMT3BQ9UBC3 853 aaKnown RBP12.8□□□□□ -0.36
HDLBP-232ENST00000470482 STK17AQ9UEE5 414 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 TUBGCP4Q9UGJ1 667 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 CDY1Q9Y6F8 540 aa12.8□□□□□ -0.36
HDLBP-232ENST00000470482 ANO9A1A5B4 782 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 WDR27A2RRH5 827 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 VPS37CA5D8V6 355 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-232ENST00000470482 NRG2O14511 850 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-232ENST00000470482 OGTO15294 1046 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 NARSO43776 548 aaKnown RBP12.79□□□□□ -0.36
HDLBP-232ENST00000470482 SEC24AO95486 1093 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 C8AP07357 584 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 ATF2P15336 505 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 CLCN5P51795 746 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 ROR1Q01973 937 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 ZC2HC1CQ53FD0 456 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-232ENST00000470482 SPATA1Q5VX52 437 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 CWF19L1Q69YN2 538 aaKnown RBP12.79□□□□□ -0.36
HDLBP-232ENST00000470482 ELMSAN1Q6PJG2 1045 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 GRASPQ7Z6J2 395 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-232ENST00000470482 TCEAL8Q8IYN2 117 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 MYCT1Q8N699 235 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 LINC00301Q8NCQ3 95 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 CDK5RAP3Q96JB5 506 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 WNT16Q9UBV4 365 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 FBXL5Q9UKA1 691 aa12.79□□□□□ -0.36
HDLBP-232ENST00000470482 ZFP37Q9Y6Q3 630 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-232ENST00000470482 DMDP11532 3685 aa12.78□□□□□ -0.36
HDLBP-232ENST00000470482 KRBA1A5PL33 1030 aa12.78□□□□□ -0.36
HDLBP-232ENST00000470482 TISP43B9A030 160 aa12.78□□□□□ -0.36
HDLBP-232ENST00000470482 PIRO00625 290 aa12.78□□□□□ -0.36
HDLBP-232ENST00000470482 STX6O43752 255 aa12.78□□□□□ -0.36
HDLBP-232ENST00000470482 KCNA1Q09470 495 aa12.78□□□□□ -0.36
HDLBP-232ENST00000470482 E2F4Q16254 413 aa12.78□□□□□ -0.36
HDLBP-232ENST00000470482 KYAT1Q16773 422 aa12.78□□□□□ -0.36
HDLBP-232ENST00000470482 CXorf38Q8TB03 319 aa12.78□□□□□ -0.36
HDLBP-232ENST00000470482 ITFG1Q8TB96 612 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms