RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	XPOT	O43592	962 aa	Known RBP	11.79	□□□□□ -0.52
SND1-208	ENST00000470463	RTN2	O75298	545 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	VNN1	O95497	513 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	STAU1	O95793	577 aa	Known RBP	11.79	□□□□□ -0.52
SND1-208	ENST00000470463	TUBB	P07437	444 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	IQCF3	P0C7M6	154 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	CYP11B1	P15538	503 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	TNFSF9	P41273	254 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	HADHB	P55084	474 aa	Known RBP	11.79	□□□□□ -0.52
SND1-208	ENST00000470463	TFAM	Q00059	246 aa	Known RBP	11.79	□□□□□ -0.52
SND1-208	ENST00000470463	CDR2	Q01850	454 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	CACNB2	Q08289	660 aa	Predicted RBP	11.79	□□□□□ -0.52
SND1-208	ENST00000470463	KIZ	Q2M2Z5	673 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	ZBTB41	Q5SVQ8	909 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	RNF180	Q86T96	592 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	RFFL	Q8WZ73	363 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	FAM212A	Q96EL1	285 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	DNAI2	Q9GZS0	605 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	NIF3L1	Q9GZT8	377 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.79	□□□□□ -0.52
SND1-208	ENST00000470463	ISCU	Q9H1K1	167 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	VRTN	Q9H8Y1	702 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	XPNPEP3	Q9NQH7	507 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	SEPT11	Q9NVA2	429 aa	Known RBP	11.79	□□□□□ -0.52
SND1-208	ENST00000470463	HDAC6	Q9UBN7	1215 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	GTF2IRD1	Q9UHL9	959 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	ITGA11	Q9UKX5	1188 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	GABRQ	Q9UN88	632 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	TRIM17	Q9Y577	477 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463	MROH7	Q68CQ1	1323 aa		11.79	□□□□□ -0.52
SND1-208	ENST00000470463		A0A0U1RQJ8	604 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	TTLL13P	A6NNM8	815 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	CES2	O00748	559 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	ECM2	O94769	699 aa	Predicted RBP	11.78	□□□□□ -0.52
SND1-208	ENST00000470463	CLSTN1	O94985	981 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	MYBL1	P10243	752 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	KRT5	P13647	590 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	CHMP4BP1	P59074	171 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	BEX3	Q00994	111 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	TMEM132D	Q14C87	1099 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	SNX17	Q15036	470 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	CLUL1	Q15846	466 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	EEF1DP3	Q658K8	133 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	MTERF4	Q7Z6M4	381 aa	Known RBP	11.78	□□□□□ -0.52
SND1-208	ENST00000470463	HACE1	Q8IYU2	909 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	RPUSD2	Q8IZ73	545 aa	Known RBP	11.78	□□□□□ -0.52
SND1-208	ENST00000470463	TRPV1	Q8NER1	839 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	RAET1E	Q8TD07	263 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	DNAJB3	Q8WWF6	145 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	ATRIP	Q8WXE1	791 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	UBXN4	Q92575	508 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	TMEM106C	Q9BVX2	250 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	TRIM6	Q9C030	488 aa	Predicted RBP	11.78	□□□□□ -0.52
SND1-208	ENST00000470463	ARHGAP39	Q9C0H5	1083 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	MTMR12	Q9C0I1	747 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	CHST12	Q9NRB3	414 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	TRIM10	Q9UDY6	481 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	LCMT1	Q9UIC8	334 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	NOCT	Q9UK39	431 aa	Known RBP	11.78	□□□□□ -0.52
SND1-208	ENST00000470463	HYOU1	Q9Y4L1	999 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	NCAN	O14594	1321 aa		11.78	□□□□□ -0.52
SND1-208	ENST00000470463	CTAGE15	A4D2H0	777 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	MOXD2P	A6NHM9	499 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	CYP26A1	O43174	497 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	TREH	O43280	583 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	CAND2	O75155	1236 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	ADAMTS4	O75173	837 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	MOCS3	O95396	460 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	CTAGE8	P0CG41	777 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	CXCL8	P10145	99 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	PRKAR2A	P13861	404 aa	Known RBP	11.77	□□□□□ -0.53
SND1-208	ENST00000470463	NOP2	P46087	812 aa	Known RBP	11.77	□□□□□ -0.53
SND1-208	ENST00000470463	GALC	P54803	685 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	GPC5	P78333	572 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	RBP5	P82980	135 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	AMPD2	Q01433	879 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	ITIH3	Q06033	890 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	ZNF699	Q32M78	642 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	ZNF667	Q5HYK9	610 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	MAP3K21	Q5TCX8	1036 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.77	□□□□□ -0.53
SND1-208	ENST00000470463	CTAGE6	Q86UF2	777 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	CTAGE4	Q8IX94	777 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	SLAIN1	Q8ND83	568 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	KLHDC9	Q8NEP7	349 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	OR5B17	Q8NGF7	314 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	LNX1	Q8TBB1	728 aa	Predicted RBP	11.77	□□□□□ -0.53
SND1-208	ENST00000470463	GOLGA1	Q92805	767 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	TATDN2	Q93075	761 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	VCPIP1	Q96JH7	1222 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	TSEN34	Q9BSV6	310 aa	Known RBP	11.77	□□□□□ -0.53
SND1-208	ENST00000470463	CELF4	Q9BZC1	486 aa	Known RBP	11.77	□□□□□ -0.53
SND1-208	ENST00000470463	CYP3A43	Q9HB55	503 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	UVRAG	Q9P2Y5	699 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	SNX12	Q9UMY4	172 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	PCDHB4	Q9Y5E5	795 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	DUSP10	Q9Y6W6	482 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	PTPRJ	Q12913	1337 aa		11.77	□□□□□ -0.53
SND1-208	ENST00000470463	LACTBL1	A8MY62	500 aa		11.76	□□□□□ -0.53
SND1-208	ENST00000470463	MED7	O43513	233 aa		11.76	□□□□□ -0.53

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