RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 GTF3C4Q9UKN8 822 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 A0A087WZ62 844 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 TNPO2O14787 897 aaKnown RBP7.55□□□□□ -1.2
KDM3A-210ENST00000470160 ZNF286BP0CG31 522 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 GNAT1P11488 350 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 ARF4P18085 180 aaPredicted RBP7.55□□□□□ -1.2
KDM3A-210ENST00000470160 CENPCQ03188 943 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 CLEC16AQ2KHT3 1053 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 ACAD10Q6JQN1 1059 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 WDR93Q6P2C0 686 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 OR5B17Q8NGF7 314 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 KAT5Q92993 513 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 TRIM11Q96F44 468 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 PBKQ96KB5 322 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 OSBPL9Q96SU4 736 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 PCDHB18PQ96TA0 734 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 FDXACB1Q9BRP7 624 aaPredicted RBP7.55□□□□□ -1.2
KDM3A-210ENST00000470160 PACSIN1Q9BY11 444 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 CYP3A43Q9HB55 503 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 UVRAGQ9P2Y5 699 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 PCDHGC3Q9UN70 934 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 TFR2Q9UP52 801 aa7.55□□□□□ -1.2
KDM3A-210ENST00000470160 SEPT4O43236 478 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 DYNC1LI2O43237 492 aaPredicted RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 ADAMTS4O75173 837 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 SGPL1O95470 568 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 DARSP14868 501 aaKnown RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 TNNI1P19237 187 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 HOXA11P31270 313 aaPredicted RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 TNFSF9P41273 254 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 CHMP4BP1P59074 171 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 YWHAEP62258 255 aaKnown RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 NCOA4Q13772 614 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 CLUL1Q15846 466 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 CCL14Q16627 93 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 TAF2Q6P1X5 1199 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 LIMS2Q7Z4I7 341 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 PHF13Q86YI8 300 aaPredicted RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 GLYCTKQ8IVS8 523 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 EFCAB13Q8IY85 973 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 ACTRT1Q8TDG2 376 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 TRAIPQ9BWF2 469 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 GCOM2Q9BZD3 368 aaPredicted RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 ZNF518BQ9C0D4 1074 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 AP5M1Q9H0R1 490 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 MROH7Q68CQ1 1323 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 TRIP12Q14669 1992 aaPredicted RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 CTAGE15A4D2H0 777 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 LSM8O95777 96 aaKnown RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 CTAGE8P0CG41 777 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 DLATP10515 647 aaKnown RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 TNFRSF8P28908 595 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 PIK3CAP42336 1068 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 PDE6CP51160 858 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 CRYBB1P53674 252 aaPredicted RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 NOP14P78316 857 aaKnown RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 GPC5P78333 572 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 ZNF568Q3ZCX4 644 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 GLE1Q53GS7 698 aaKnown RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 MFSD14CQ5VZR4 134 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 CTAGE6Q86UF2 777 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 NT5DC3Q86UY8 548 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 CTAGE4Q8IX94 777 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 PPM1KQ8N3J5 372 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 LRRN4CLQ8ND94 238 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 PXYLP1Q8TE99 480 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 U2AF1L4Q8WU68 220 aaKnown RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 UBXN4Q92575 508 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 MTG1Q9BT17 334 aaPredicted RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 NIF3L1Q9GZT8 377 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 RPF1Q9H9Y2 349 aaKnown RBP7.54□□□□□ -1.2
KDM3A-210ENST00000470160 CREBZFQ9NS37 354 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 ITGA11Q9UKX5 1188 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 NUB1Q9Y5A7 615 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 SQORQ9Y6N5 450 aa7.54□□□□□ -1.2
KDM3A-210ENST00000470160 MACROD2A1Z1Q3 448 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 INO80B-WBP1J3KQ70 363 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 CYP26A1O43174 497 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 B4GALT5O43286 388 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 PALMO75781 387 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 PAEPP09466 180 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 STAG3L1P0CL83 205 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 HIC1Q14526 733 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 FSCN1Q16658 493 aaKnown RBP7.53□□□□□ -1.2
KDM3A-210ENST00000470160 ARHGAP44Q17R89 818 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 SLC10A6Q3KNW5 377 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 TRMT1LQ7Z2T5 733 aaKnown RBP7.53□□□□□ -1.2
KDM3A-210ENST00000470160 RPUSD2Q8IZ73 545 aaKnown RBP7.53□□□□□ -1.2
KDM3A-210ENST00000470160 EIF1ADQ8N9N8 165 aaKnown RBP7.53□□□□□ -1.2
KDM3A-210ENST00000470160 SLC20A1Q8WUM9 679 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 ANKRD36BP1Q96IX9 119 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 NLRP4Q96MN2 994 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 SEZ6LQ9BYH1 1024 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 CNTN3Q9P232 1028 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 ANKFY1Q9P2R3 1169 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 MIF4GDA9UHW6 222 aaKnown RBP7.53□□□□□ -1.2
KDM3A-210ENST00000470160 CAND2O75155 1236 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 KIF4AO95239 1232 aa7.53□□□□□ -1.2
KDM3A-210ENST00000470160 CST3P01034 146 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms