RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 ERCC6LQ2NKX8 1250 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 FUT10Q6P4F1 479 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 DHX40Q8IX18 779 aaKnown RBP12.71□□□□□ -0.37
FAM228B-203ENST00000469867 RNF168Q8IYW5 571 aaPredicted RBP12.71□□□□□ -0.37
FAM228B-203ENST00000469867 DEPTORQ8TB45 409 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 CCDC195A0A1B0GUA6 201 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 RECQL4O94761 1208 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 EFEMP2O95967 443 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 GLUD1P00367 558 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 PRKCBP05771 671 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 DSG1Q02413 1049 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 ORC2Q13416 577 aaPredicted RBP12.7□□□□□ -0.38
FAM228B-203ENST00000469867 ZRSR1Q15695 479 aaKnown RBP12.7□□□□□ -0.38
FAM228B-203ENST00000469867 PPP4R3CPQ6ZMV5 832 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 PHOX2BQ99453 314 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 HERC2P3Q9BVR0 1158 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 COLEC11Q9BWP8 271 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 EPC1Q9H2F5 836 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 CHST7Q9NS84 486 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 GDAQ9Y2T3 454 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 PTGESO14684 152 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 TADA2AO75478 443 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 NAMPTP43490 491 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
FAM228B-203ENST00000469867 KARSQ15046 597 aaKnown RBP12.7□□□□□ -0.38
FAM228B-203ENST00000469867 EEF1DP3Q658K8 133 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 LRRC8AQ8IWT6 810 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 AOPEPQ8N6M6 819 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 PRSS33Q8NF86 280 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 SNX29Q8TEQ0 813 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 RIN2Q8WYP3 895 aaPredicted RBP12.7□□□□□ -0.38
FAM228B-203ENST00000469867 TIGD1Q96MW7 591 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 C2orf40Q9H1Z8 148 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 USTQ9Y2C2 406 aa12.7□□□□□ -0.38
FAM228B-203ENST00000469867 ACKR2O00590 384 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 FAM187BQ17R55 369 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 USP41Q3LFD5 358 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 GLRA4Q5JXX5 417 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 RTP2Q5QGT7 225 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 PRSS55Q6UWB4 352 aaPredicted RBP12.69□□□□□ -0.38
FAM228B-203ENST00000469867 C15orf39Q6ZRI6 1047 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 IGSF22Q8N9C0 903 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 ADPGKQ9BRR6 497 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 CCDC113Q9H0I3 377 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 EP300Q09472 2414 aaPredicted RBP12.69□□□□□ -0.38
FAM228B-203ENST00000469867 PLXNA3P51805 1871 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 DCHS1Q96JQ0 3298 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 E9PMD0 336 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 N4BP1O75113 896 aaKnown RBP12.69□□□□□ -0.38
FAM228B-203ENST00000469867 THP07101 528 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 TUSC3Q13454 348 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 POSTNQ15063 836 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 CEP57Q86XR8 500 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 NEK11Q8NG66 645 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 ACSF2Q96CM8 615 aaPredicted RBP12.69□□□□□ -0.38
FAM228B-203ENST00000469867 IFT74Q96LB3 600 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 KCNH6Q9H252 994 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 SSX2IPQ9Y2D8 614 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 TRIP11Q15643 1979 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 FAM186AA6NE01 2351 aa12.69□□□□□ -0.38
FAM228B-203ENST00000469867 N4BP3O15049 544 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 POLR3GO15318 223 aaPredicted RBP12.68□□□□□ -0.38
FAM228B-203ENST00000469867 TGM5O43548 720 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 KIF4AO95239 1232 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 SKILP12757 684 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 AVPR2P30518 371 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 PPP2R5AQ15172 486 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 TAF3Q5VWG9 929 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 OTOP3Q7RTS5 596 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 UBALD2Q8IYN6 164 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 ZNF397Q8NF99 534 aaPredicted RBP12.68□□□□□ -0.38
FAM228B-203ENST00000469867 BLZF1Q9H2G9 400 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 ANO10Q9NW15 660 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 SF3B1O75533 1304 aaKnown RBP eCLIP12.68□□□□□ -0.38
FAM228B-203ENST00000469867 CCDC169A6NNP5 214 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 IGFBP6P24592 240 aaPredicted RBP12.68□□□□□ -0.38
FAM228B-203ENST00000469867 PEX3P56589 373 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 RAD51AP2Q09MP3 1159 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 PDIA5Q14554 519 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 E2F4Q16254 413 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 HSP90AA4PQ58FG1 418 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 FAM171A1Q5VUB5 890 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 ZDHHC14Q8IZN3 488 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 ST13P5Q8NFI4 369 aaPredicted RBP12.68□□□□□ -0.38
FAM228B-203ENST00000469867 KIFAP3Q92845 792 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 RAB34Q9BZG1 259 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 RXFP1Q9HBX9 757 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 PAXBP1Q9Y5B6 917 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 DOCK8Q8NF50 2099 aa12.68□□□□□ -0.38
FAM228B-203ENST00000469867 K7ERI5 159 aa12.67□□□□□ -0.38
FAM228B-203ENST00000469867 TPM3P06753 285 aa12.67□□□□□ -0.38
FAM228B-203ENST00000469867 OSTNP61366 133 aa12.67□□□□□ -0.38
FAM228B-203ENST00000469867 TCF15Q12870 199 aa12.67□□□□□ -0.38
FAM228B-203ENST00000469867 KCNK18Q7Z418 384 aa12.67□□□□□ -0.38
FAM228B-203ENST00000469867 SMYD4Q8IYR2 804 aaPredicted RBP12.67□□□□□ -0.38
FAM228B-203ENST00000469867 CEP120Q8N960 986 aa12.67□□□□□ -0.38
FAM228B-203ENST00000469867 SMG7Q92540 1137 aaKnown RBP12.67□□□□□ -0.38
FAM228B-203ENST00000469867 PAGE5Q96GU1 130 aa12.67□□□□□ -0.38
FAM228B-203ENST00000469867 KCNK12Q9HB15 430 aa12.67□□□□□ -0.38
FAM228B-203ENST00000469867 FAM53CQ9NYF3 392 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms