RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 CXCL8P10145 99 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 MRE11P49959 708 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 RESTQ13127 1097 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 HTR4Q13639 388 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 MCM6Q14566 821 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 UVSSAQ2YD98 709 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 VARS2Q5ST30 1063 aaKnown RBP17.8■□□□□ 0.44
COL9A3-208ENST00000469802 AXDND1Q5T1B0 1012 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-208ENST00000469802 ALYREFQ86V81 257 aaKnown RBP17.8■□□□□ 0.44
COL9A3-208ENST00000469802 RSAD2Q8WXG1 361 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 LARP4BQ92615 738 aaKnown RBP17.8■□□□□ 0.44
COL9A3-208ENST00000469802 PLEKHA5Q9HAU0 1116 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 PARVGQ9HBI0 331 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 TUBGCP4Q9UGJ1 667 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 TBX20Q9UMR3 447 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 CLIC4Q9Y696 253 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 ZFP37Q9Y6Q3 630 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-208ENST00000469802 TCHHQ07283 1943 aa17.79■□□□□ 0.44
COL9A3-208ENST00000469802 K7ENM7 598 aa17.79■□□□□ 0.44
COL9A3-208ENST00000469802 CCL16O15467 120 aa17.79■□□□□ 0.44
COL9A3-208ENST00000469802 NARSO43776 548 aaKnown RBP17.79■□□□□ 0.44
COL9A3-208ENST00000469802 XYLBO75191 536 aa17.79■□□□□ 0.44
COL9A3-208ENST00000469802 FAM13AO94988 1023 aa17.79■□□□□ 0.44
COL9A3-208ENST00000469802 CLTAP09496 248 aa17.79■□□□□ 0.44
COL9A3-208ENST00000469802 SYT1P21579 422 aa17.79■□□□□ 0.44
COL9A3-208ENST00000469802 FSHRP23945 695 aa17.79■□□□□ 0.44
COL9A3-208ENST00000469802 ROR1Q01973 937 aa17.79■□□□□ 0.44
COL9A3-208ENST00000469802 MRPL58Q14197 206 aaKnown RBP17.79■□□□□ 0.44
COL9A3-208ENST00000469802 ASTLQ6HA08 431 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-208ENST00000469802 USP49Q70CQ1 688 aa17.79■□□□□ 0.44
COL9A3-208ENST00000469802 GRASPQ7Z6J2 395 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-208ENST00000469802 INTS4Q96HW7 963 aaKnown RBP17.79■□□□□ 0.44
COL9A3-208ENST00000469802 SUSD3Q96L08 255 aa17.79■□□□□ 0.44
COL9A3-208ENST00000469802 BACH2Q9BYV9 841 aa17.79■□□□□ 0.44
COL9A3-208ENST00000469802 FBXO2Q9UK22 296 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-208ENST00000469802 MORC2Q9Y6X9 1032 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-208ENST00000469802 WDR27A2RRH5 827 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 HNRNPDLO14979 420 aaKnown RBP17.78■□□□□ 0.44
COL9A3-208ENST00000469802 GALR2O43603 387 aaPredicted RBP17.78■□□□□ 0.44
COL9A3-208ENST00000469802 TRAK2O60296 914 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 ABLIM3O94929 683 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 ADRB2P07550 413 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 SRFP11831 508 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 NPR3P17342 541 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 LRPAP1P30533 357 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 TNFSF9P41273 254 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 LIG4P49917 911 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 CLCN5P51795 746 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 NTHL1P78549 312 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 DHX8Q14562 1220 aaKnown RBP17.78■□□□□ 0.44
COL9A3-208ENST00000469802 ZBTB6Q15916 424 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 SLC39A4Q6P5W5 647 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 MAP4K3Q8IVH8 894 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 SLC44A3Q8N4M1 653 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 MYCT1Q8N699 235 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 ZNF461Q8TAF7 563 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 BICD1Q96G01 975 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 EPSTI1Q96J88 318 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 PHOX2BQ99453 314 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.78■□□□□ 0.44
COL9A3-208ENST00000469802 MIA3Q5JRA6 1907 aa17.78■□□□□ 0.44
COL9A3-208ENST00000469802 SCN1AP35498 2009 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 USP34Q70CQ2 3546 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 ARHGEF37A1IGU5 675 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 TBCAO75347 108 aaKnown RBP17.77■□□□□ 0.44
COL9A3-208ENST00000469802 AARSP49588 968 aaKnown RBP eCLIP17.77■□□□□ 0.44
COL9A3-208ENST00000469802 GTF2BQ00403 316 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 ENOX2Q16206 610 aaKnown RBP17.77■□□□□ 0.44
COL9A3-208ENST00000469802 KYAT1Q16773 422 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 ZBTB41Q5SVQ8 909 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 RASSF8Q8NHQ8 419 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 MFSD1Q9H3U5 465 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 ST6GALNAC4Q9H4F1 302 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 HCFC1R1Q9NWW0 138 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 WNT16Q9UBV4 365 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 STK17AQ9UEE5 414 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 CDH7Q9ULB5 785 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 NUB1Q9Y5A7 615 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 SRPRBQ9Y5M8 271 aaKnown RBP17.77■□□□□ 0.44
COL9A3-208ENST00000469802 NUMBLQ9Y6R0 609 aa17.77■□□□□ 0.44
COL9A3-208ENST00000469802 A0A0B4J269 797 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 H7C4K7 107 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 OGTO15294 1046 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 KRT18P05783 430 aaKnown RBP17.76■□□□□ 0.43
COL9A3-208ENST00000469802 AOC1P19801 751 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 CYP3A5P20815 502 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 MARCKSP29966 332 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-208ENST00000469802 ABCD1P33897 745 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 MCM4P33991 863 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 DDIT3P35638 169 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 PPP2R3AQ06190 1150 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 FAM173BQ6P4H8 233 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 SIX5Q8N196 739 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 TMEM130Q8N3G9 435 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 ITFG1Q8TB96 612 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 FGF13Q92913 245 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 SLC2A4RGQ9NR83 387 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 DNMT3BQ9UBC3 853 aaKnown RBP17.76■□□□□ 0.43
COL9A3-208ENST00000469802 FBXL5Q9UKA1 691 aa17.76■□□□□ 0.43
COL9A3-208ENST00000469802 KCNH3Q9ULD8 1083 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms