RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 HOXD13P35453 343 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 ANP32AP39687 249 aaKnown RBP10.58□□□□□ -0.72
SRRT-208ENST00000469602 POU5F1Q01860 360 aaKnown RBP10.58□□□□□ -0.72
SRRT-208ENST00000469602 CREMQ03060 361 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 SMAD4Q13485 552 aaKnown RBP10.58□□□□□ -0.72
SRRT-208ENST00000469602 SMAD2Q15796 467 aaKnown RBP10.58□□□□□ -0.72
SRRT-208ENST00000469602 ZBTB6Q15916 424 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 RTP2Q5QGT7 225 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 ANKRD54Q6NXT1 300 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 CD300LGQ6UXG3 332 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 CRELD2Q6UXH1 353 aaPredicted RBP10.58□□□□□ -0.72
SRRT-208ENST00000469602 CD302Q8IX05 232 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 C3orf58Q8NDZ4 430 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 ZNF507Q8TCN5 953 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 SLC22A17Q8WUG5 538 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 RIN2Q8WYP3 895 aaPredicted RBP10.58□□□□□ -0.72
SRRT-208ENST00000469602 FAM212AQ96EL1 285 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 KIF12Q96FN5 646 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 UHRF1Q96T88 793 aaPredicted RBP10.58□□□□□ -0.72
SRRT-208ENST00000469602 TTPALQ9BTX7 342 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 GOLPH3LQ9H4A5 285 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 RXFP1Q9HBX9 757 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.58□□□□□ -0.72
SRRT-208ENST00000469602 DZANK1Q9NVP4 752 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 TUBGCP4Q9UGJ1 667 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 UBE4BO95155 1302 aa10.58□□□□□ -0.72
SRRT-208ENST00000469602 SCN1AP35498 2009 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 GOLGA6L4A6NEF3 574 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 MBTPS2O43462 519 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 XPOTO43592 962 aaKnown RBP10.57□□□□□ -0.72
SRRT-208ENST00000469602 ZNF202O95125 648 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 EPCAMP16422 314 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 HOXB8P17481 243 aaPredicted RBP10.57□□□□□ -0.72
SRRT-208ENST00000469602 CYP3A5P20815 502 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 FGFR3P22607 806 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 IGFBP6P24592 240 aaPredicted RBP10.57□□□□□ -0.72
SRRT-208ENST00000469602 LRPAP1P30533 357 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 CLCN4P51793 760 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 JADE1Q6IE81 842 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 PDXDC1Q6P996 788 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 SYCE2Q6PIF2 218 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.57□□□□□ -0.72
SRRT-208ENST00000469602 KRBA2Q6ZNG9 492 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 CEP57Q86XR8 500 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 SCFD1Q8WVM8 642 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 PIK3R5Q8WYR1 880 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 SAAL1Q96ER3 474 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 NECAB3Q96P71 396 aaPredicted RBP10.57□□□□□ -0.72
SRRT-208ENST00000469602 CBWD1Q9BRT8 395 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 FAM213AQ9BRX8 229 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 ASB7Q9H672 318 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 FNIP2Q9P278 1114 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 UBQLN1Q9UMX0 589 aaKnown RBP10.57□□□□□ -0.72
SRRT-208ENST00000469602 DERAQ9Y315 318 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 C2orf16Q68DN1 1984 aa10.57□□□□□ -0.72
SRRT-208ENST00000469602 I3L4J1 428 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 KIAA0391O15091 583 aaKnown RBP10.56□□□□□ -0.72
SRRT-208ENST00000469602 EXTL3O43909 919 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 IL18RAPO95256 599 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 LDHAP00338 332 aaKnown RBP10.56□□□□□ -0.72
SRRT-208ENST00000469602 C1RP00736 705 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 NFICP08651 508 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 RPL17P18621 184 aaKnown RBP10.56□□□□□ -0.72
SRRT-208ENST00000469602 BRCC3P46736 316 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 PSMD2Q13200 908 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 TMEM132DQ14C87 1099 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 BMT2Q1RMZ1 405 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 KMT5BQ4FZB7 885 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 SPATA1Q5VX52 437 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 ARMCX5Q6P1M9 558 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 PRSS55Q6UWB4 352 aaPredicted RBP10.56□□□□□ -0.72
SRRT-208ENST00000469602 BRSK2Q8IWQ3 736 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 FMR1NBQ8N0W7 255 aaPredicted RBP10.56□□□□□ -0.72
SRRT-208ENST00000469602 BEST2Q8NFU1 509 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 LNX1Q8TBB1 728 aaPredicted RBP10.56□□□□□ -0.72
SRRT-208ENST00000469602 CCDC34Q96HJ3 373 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 FBXL18Q96ME1 805 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 S1PR5Q9H228 398 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 PCIF1Q9H4Z3 704 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 SLC39A2Q9NP94 309 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 EXOC1Q9NV70 894 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 C2CD2Q9Y426 696 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 USP15Q9Y4E8 981 aaPredicted RBP10.56□□□□□ -0.72
SRRT-208ENST00000469602 NUB1Q9Y5A7 615 aa10.56□□□□□ -0.72
SRRT-208ENST00000469602 GOLGA8IPA6NC78 632 aa10.55□□□□□ -0.72
SRRT-208ENST00000469602 GOLGA8JA6NMD2 632 aa10.55□□□□□ -0.72
SRRT-208ENST00000469602 TGFB1I1O43294 461 aa10.55□□□□□ -0.72
SRRT-208ENST00000469602 GLUD1P00367 558 aa10.55□□□□□ -0.72
SRRT-208ENST00000469602 RPN1P04843 607 aaKnown RBP10.55□□□□□ -0.72
SRRT-208ENST00000469602 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
SRRT-208ENST00000469602 TKTP29401 623 aaKnown RBP10.55□□□□□ -0.72
SRRT-208ENST00000469602 MCM4P33991 863 aa10.55□□□□□ -0.72
SRRT-208ENST00000469602 GUCY2FP51841 1108 aa10.55□□□□□ -0.72
SRRT-208ENST00000469602 SNRPFP62306 86 aaKnown RBP10.55□□□□□ -0.72
SRRT-208ENST00000469602 FAM160A1Q05DH4 1040 aa10.55□□□□□ -0.72
SRRT-208ENST00000469602 ITIH3Q06033 890 aa10.55□□□□□ -0.72
SRRT-208ENST00000469602 DPYDQ12882 1025 aa10.55□□□□□ -0.72
SRRT-208ENST00000469602 STK4Q13043 487 aa10.55□□□□□ -0.72
SRRT-208ENST00000469602 CBX2Q14781 532 aaPredicted RBP10.55□□□□□ -0.72
SRRT-208ENST00000469602 PSMD5Q16401 504 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms