RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 MX1P20591 662 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 PHC1P78364 1004 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 SREBF2Q12772 1141 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 NOGQ13253 232 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 PICALMQ13492 652 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 GPR158Q5T848 1215 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 SLC9C2Q5TAH2 1124 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 OGFOD2Q6N063 350 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 RGMBQ6NW40 437 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 SPATS2Q86XZ4 545 aaKnown RBP7.38□□□□□ -1.23
PTCD3-208ENST00000469585 PASD1Q8IV76 773 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 TEX11Q8IYF3 940 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 FOXRED1Q96CU9 486 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-208ENST00000469585 PRMT6Q96LA8 375 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-208ENST00000469585 GBP4Q96PP9 640 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 GORASP1Q9BQQ3 440 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 CRNKL1Q9BZJ0 848 aaKnown RBP7.38□□□□□ -1.23
PTCD3-208ENST00000469585 DHX36Q9H2U1 1008 aaKnown RBP7.38□□□□□ -1.23
PTCD3-208ENST00000469585 BOLA2Q9H3K6 86 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 TOMM22Q9NS69 142 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 FAN1Q9Y2M0 1017 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 RNF114Q9Y508 228 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 ASB1Q9Y576 335 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 TRPM7Q96QT4 1865 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 GOLGA6L22H0YM25 854 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 CA12O43570 354 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 ENTPD3O75355 529 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 MPIG6BO95866 241 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 ENO2P09104 434 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-208ENST00000469585 LIMS1P48059 325 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 ITGA1P56199 1179 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 TMPRSS15P98073 1019 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 PFKPQ01813 784 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 TCP10Q12799 353 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 PRKG1Q13976 671 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 LRRC32Q14392 662 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 EPHA7Q15375 998 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 TERF2Q15554 542 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 RTN4RL1Q86UN2 441 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-208ENST00000469585 ANKRD13AQ8IZ07 590 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 MAGEB6Q8N7X4 407 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 LINC00482Q8N8I6 264 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 DTX3Q8N9I9 347 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 EXOC6Q8TAG9 804 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 FAM151AQ8WW52 585 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 SLC5A5Q92911 643 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 CCDC136Q96JN2 1154 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 CAPNS2Q96L46 248 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 SIGLEC10Q96LC7 697 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 NOX5Q96PH1 765 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 FSD1Q9BTV5 496 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 ZNF341Q9BYN7 854 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 NACAP1Q9BZK3 213 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 ZNF287Q9HBT7 754 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 PCDH18Q9HCL0 1135 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 EPB41L4AQ9HCS5 686 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-208ENST00000469585 SLC39A2Q9NP94 309 aa7.37□□□□□ -1.23
PTCD3-208ENST00000469585 CNTNAP1P78357 1384 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 WDR33Q9C0J8 1336 aaKnown RBP7.36□□□□□ -1.23
PTCD3-208ENST00000469585 HIP1O00291 1037 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 ULK1O75385 1050 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 SLC3A2P08195 630 aaKnown RBP7.36□□□□□ -1.23
PTCD3-208ENST00000469585 PTGS1P23219 599 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 MC4RP32245 332 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 MAP2K2P36507 400 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 IRX6P78412 446 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-208ENST00000469585 ADAM9Q13443 819 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 BROXQ5VW32 411 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 VASNQ6EMK4 673 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 CDC42EP5Q6NZY7 148 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 CASC1Q6TDU7 716 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 TMC5Q6UXY8 1006 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 NECAB2Q7Z6G3 386 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 SAPCD2Q86UD0 394 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 CILP2Q8IUL8 1156 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 ZZZ3Q8IYH5 903 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 ZNF610Q8N9Z0 462 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 NSUN4Q96CB9 384 aaKnown RBP7.36□□□□□ -1.23
PTCD3-208ENST00000469585 C11orf84Q9BUA3 381 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-208ENST00000469585 AATFQ9NY61 560 aaKnown RBP eCLIP7.36□□□□□ -1.23
PTCD3-208ENST00000469585 SLC5A4Q9NY91 659 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 AK9Q5TCS8 1911 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 ECM29Q5VYK3 1845 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 PAPPA2Q9BXP8 1791 aa7.36□□□□□ -1.23
PTCD3-208ENST00000469585 RPAP1Q9BWH6 1393 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-208ENST00000469585 GAKO14976 1311 aa7.35□□□□□ -1.23
PTCD3-208ENST00000469585 AOX1Q06278 1338 aa7.35□□□□□ -1.23
PTCD3-208ENST00000469585 GPR75-ASB3A0A0A6YYF3 556 aa7.35□□□□□ -1.23
PTCD3-208ENST00000469585 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-208ENST00000469585 ALG1L2C9J202 215 aa7.35□□□□□ -1.23
PTCD3-208ENST00000469585 PLA2G1BP04054 148 aaKnown RBP7.35□□□□□ -1.23
PTCD3-208ENST00000469585 TMEM253P0C7T8 217 aa7.35□□□□□ -1.23
PTCD3-208ENST00000469585 GNAT2P19087 354 aa7.35□□□□□ -1.23
PTCD3-208ENST00000469585 LSP1P33241 339 aa7.35□□□□□ -1.23
PTCD3-208ENST00000469585 RGS3P49796 1198 aa7.35□□□□□ -1.23
PTCD3-208ENST00000469585 INHBEP58166 350 aa7.35□□□□□ -1.23
PTCD3-208ENST00000469585 HTRA3P83110 453 aa7.35□□□□□ -1.23
PTCD3-208ENST00000469585 SKIDA1Q1XH10 827 aa7.35□□□□□ -1.23
PTCD3-208ENST00000469585 APOBEC3HQ6NTF7 200 aaKnown RBP7.35□□□□□ -1.23
PTCD3-208ENST00000469585 CHD1LQ86WJ1 897 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms