RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 ADGRA3Q8IWK6 1321 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 GOLGA8SH3BPF8 625 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 GOLGA8MH3BSY2 632 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 CCNE2O96020 404 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 ITIH2P19823 946 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 ZNF268Q14587 947 aaPredicted RBP12.86□□□□□ -0.35
VARS2-205ENST00000469358 TKFCQ3LXA3 575 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 C12orf50Q8NA57 414 aaPredicted RBP12.86□□□□□ -0.35
VARS2-205ENST00000469358 FBXL13Q8NEE6 735 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 ROPN1BQ9BZX4 212 aaPredicted RBP12.86□□□□□ -0.35
VARS2-205ENST00000469358 ROPN1Q9HAT0 212 aaPredicted RBP12.86□□□□□ -0.35
VARS2-205ENST00000469358 ETNK1Q9HBU6 452 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 RAVER2Q9HCJ3 691 aaKnown RBP12.86□□□□□ -0.35
VARS2-205ENST00000469358 GRID1Q9ULK0 1009 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 TBX20Q9UMR3 447 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 ARL2BPQ9Y2Y0 163 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 TAC1P20366 129 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 TARSP26639 723 aaKnown RBP12.86□□□□□ -0.35
VARS2-205ENST00000469358 DSG3P32926 999 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 MTMR1Q13613 665 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 CLUL1Q15846 466 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 P3H1Q32P28 736 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 MCOLN2Q8IZK6 566 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 ZNF516Q92618 1163 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 UTP4Q969X6 686 aaKnown RBP12.86□□□□□ -0.35
VARS2-205ENST00000469358 L3MBTL3Q96JM7 780 aaPredicted RBP12.86□□□□□ -0.35
VARS2-205ENST00000469358 TAAR1Q96RJ0 339 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 FAM167BQ9BTA0 163 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 UVRAGQ9P2Y5 699 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 C15orf41Q9Y2V0 281 aa12.86□□□□□ -0.35
VARS2-205ENST00000469358 YDJCA8MPS7 323 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 FDX1P10109 184 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 GBP1P32455 592 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 SEZ6Q53EL9 994 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 FMNL3Q8IVF7 1028 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 TMEM161BQ8NDZ6 487 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 MAGEC3Q8TD91 643 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 RBM15Q96T37 977 aaKnown RBP eCLIP12.85□□□□□ -0.35
VARS2-205ENST00000469358 AGO4Q9HCK5 861 aaKnown RBP12.85□□□□□ -0.35
VARS2-205ENST00000469358 DONSONQ9NYP3 566 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 ADAM22Q9P0K1 906 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 TESPA1A2RU30 521 aaPredicted RBP12.85□□□□□ -0.35
VARS2-205ENST00000469358 RAD17O75943 681 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 ALDH1B1P30837 517 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 MSH2P43246 934 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 GAD2Q05329 585 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 PTK6Q13882 451 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 TCEAL1Q15170 157 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 ZNF449Q6P9G9 518 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 ZNF365Q70YC5 407 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 RIT2Q99578 217 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 PITPNM3Q9BZ71 974 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 MYLK2Q9H1R3 596 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 SAYSD1Q9NPB0 183 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 NKX1-2Q9UD57 310 aaPredicted RBP12.85□□□□□ -0.35
VARS2-205ENST00000469358 WDR91A4D1P6 747 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 GAS8O95995 478 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 ACOT2P49753 483 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 MIS18BP1Q6P0N0 1132 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 ERP27Q96DN0 273 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 EBF2Q9HAK2 575 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 PRKAG3Q9UGI9 489 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 HAO1Q9UJM8 370 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 SERPINA10Q9UK55 444 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 ZNF536O15090 1300 aa12.85□□□□□ -0.35
VARS2-205ENST00000469358 RBBP6Q7Z6E9 1792 aaKnown RBP12.84□□□□□ -0.35
VARS2-205ENST00000469358 CFAP73A6NFT4 308 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 HNRNPDLO14979 420 aaKnown RBP12.84□□□□□ -0.35
VARS2-205ENST00000469358 P4HA2O15460 535 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 UNGP13051 313 aaPredicted RBP12.84□□□□□ -0.35
VARS2-205ENST00000469358 ATF7P17544 494 aaPredicted RBP12.84□□□□□ -0.35
VARS2-205ENST00000469358 PKN2Q16513 984 aaKnown RBP12.84□□□□□ -0.35
VARS2-205ENST00000469358 TXNRD3NBQ6F5E7 133 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 ANO5Q75V66 913 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 CHURC1Q8WUH1 139 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 TRAIPQ9BWF2 469 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 TMEM8AQ9HCN3 771 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 NKIRAS1Q9NYS0 192 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 SAE1Q9UBE0 346 aaPredicted RBP12.84□□□□□ -0.35
VARS2-205ENST00000469358 PTPRJQ12913 1337 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 MYPNQ86TC9 1320 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 FGFR1P11362 822 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 RPL7AP62424 266 aaKnown RBP12.84□□□□□ -0.35
VARS2-205ENST00000469358 ATL2Q8NHH9 583 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 BICD1Q96G01 975 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 MASTLQ96GX5 879 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 KMT5AQ9NQR1 393 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 ZMYND8Q9ULU4 1186 aaPredicted RBP12.84□□□□□ -0.35
VARS2-205ENST00000469358 ZNFX1Q9P2E3 1918 aaKnown RBP12.84□□□□□ -0.35
VARS2-205ENST00000469358 NRXN2Q9P2S2 1712 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 UMODL1Q5DID0 1318 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 UBR3Q6ZT12 1888 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 A0A1W2PPM1 405 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 NEBLO76041 1014 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 GCAP28676 217 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 NOP14P78316 857 aaKnown RBP12.84□□□□□ -0.35
VARS2-205ENST00000469358 ZBTB41Q5SVQ8 909 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 ANKMY2Q8IV38 441 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 C7orf43Q8WVR3 580 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 OSBPL8Q9BZF1 889 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms