RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 STRIP1Q5VSL9 837 aa5.5□□□□□ -1.53
SCFD1-205ENST00000469043 PPP4R3AQ6IN85 833 aa5.5□□□□□ -1.53
SCFD1-205ENST00000469043 CHST15Q7LFX5 561 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-205ENST00000469043 MAATS1Q7Z4T9 603 aa5.5□□□□□ -1.53
SCFD1-205ENST00000469043 KIF18BQ86Y91 864 aa5.5□□□□□ -1.53
SCFD1-205ENST00000469043 PHYKPLQ8IUZ5 450 aa5.5□□□□□ -1.53
SCFD1-205ENST00000469043 SNRNP27Q8WVK2 155 aaKnown RBP5.5□□□□□ -1.53
SCFD1-205ENST00000469043 CPPED1Q9BRF8 314 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-205ENST00000469043 TOR3AQ9H497 397 aa5.5□□□□□ -1.53
SCFD1-205ENST00000469043 SAGE1Q9NXZ1 904 aa5.5□□□□□ -1.53
SCFD1-205ENST00000469043 CLIC5Q9NZA1 410 aa5.5□□□□□ -1.53
SCFD1-205ENST00000469043 PCDHGB3Q9Y5G1 929 aa5.5□□□□□ -1.53
SCFD1-205ENST00000469043 COL4A3Q01955 1670 aa5.5□□□□□ -1.53
SCFD1-205ENST00000469043 ZAR1LA6NP61 321 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 NRP1O14786 923 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 HOXA3O43365 443 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-205ENST00000469043 CTNND1O60716 968 aaKnown RBP5.49□□□□□ -1.53
SCFD1-205ENST00000469043 ULK1O75385 1050 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 GLRX3O76003 335 aaKnown RBP5.49□□□□□ -1.53
SCFD1-205ENST00000469043 CFBP00751 764 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 RBP3P10745 1247 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 ZKSCAN1P17029 563 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-205ENST00000469043 RHCEP18577 417 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 LAG3P18627 525 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 NR4A1P22736 598 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 GPSM2P81274 684 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 RHDQ02161 417 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 TRIM14Q14142 442 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 MYBPC3Q14896 1274 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 TOMM20Q15388 145 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 METTL24Q5JXM2 366 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 IFIT1BQ5T764 474 aaKnown RBP5.49□□□□□ -1.53
SCFD1-205ENST00000469043 MZT2AQ6P582 158 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 C7orf31Q8N865 590 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 SMC1BQ8NDV3 1235 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 SLC35G2Q8TBE7 412 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 ORAI3Q9BRQ5 295 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 PITHD1Q9GZP4 211 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-205ENST00000469043 TRMT13Q9NUP7 481 aaKnown RBP5.49□□□□□ -1.53
SCFD1-205ENST00000469043 MKS1Q9NXB0 559 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 FNIP2Q9P278 1114 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 PGAP2Q9UHJ9 254 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 EIF2B4Q9UI10 523 aaKnown RBP5.49□□□□□ -1.53
SCFD1-205ENST00000469043 DNM3Q9UQ16 869 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 MRFAP1Q9Y605 127 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 HS3ST4Q9Y661 456 aa5.49□□□□□ -1.53
SCFD1-205ENST00000469043 AP1G1O43747 822 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 VDRP11473 427 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 RRM1P23921 792 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 PTX3P26022 381 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-205ENST00000469043 LSSP48449 732 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 DSG1Q02413 1049 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 HECTD2Q5U5R9 776 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 B3GNT9Q6UX72 402 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 LDHAL6AQ6ZMR3 332 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 RINLQ6ZS11 566 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 KANSL1Q7Z3B3 1105 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 FAM83AQ86UY5 434 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 FAM43AQ8N2R8 423 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 SPATA5Q8NB90 893 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 GLB1L3Q8NCI6 653 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-205ENST00000469043 OR5M3Q8NGP4 307 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 CCT6BQ92526 530 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 CDK5RAP3Q96JB5 506 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 HIST1H2AHQ96KK5 128 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 HIST1H2AJQ99878 128 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 PDCD2LQ9BRP1 358 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 NOL10Q9BSC4 688 aaKnown RBP5.48□□□□□ -1.53
SCFD1-205ENST00000469043 RSPH9Q9H1X1 276 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-205ENST00000469043 MTG2Q9H4K7 406 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 EMC7Q9NPA0 242 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 NOL7Q9UMY1 257 aaKnown RBP5.48□□□□□ -1.53
SCFD1-205ENST00000469043 HDAC5Q9UQL6 1122 aa5.48□□□□□ -1.53
SCFD1-205ENST00000469043 CBX4O00257 560 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 FIBPO43427 364 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 XPOTO43592 962 aaKnown RBP5.47□□□□□ -1.53
SCFD1-205ENST00000469043 SNX2O60749 519 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 GAS7O60861 476 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 OPHN1O60890 802 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 STC2O76061 302 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 PRPF6O94906 941 aaKnown RBP5.47□□□□□ -1.53
SCFD1-205ENST00000469043 SLC5A1P13866 664 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 SLC9A1P19634 815 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 MAPK9P45984 424 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 TERF1P54274 439 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 KRT85P78386 507 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 TBX2Q13207 712 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-205ENST00000469043 PDCD2Q16342 344 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-205ENST00000469043 CCDC96Q2M329 555 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 TUBB8Q3ZCM7 444 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 RRP12Q5JTH9 1297 aaKnown RBP5.47□□□□□ -1.53
SCFD1-205ENST00000469043 DACT2Q5SW24 774 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 KIAA1841Q6NSI8 718 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 C11orf74Q86VG3 221 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 ZZZ3Q8IYH5 903 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 SDR16C5Q8N3Y7 309 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 TRIM63Q969Q1 353 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 ZNF764Q96H86 408 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-205ENST00000469043 SGCZQ96LD1 299 aa5.47□□□□□ -1.53
SCFD1-205ENST00000469043 TBATAQ96M53 351 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms