RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 DPP7Q9UHL4 492 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 MEFVO15553 781 aaPredicted RBP15.76■□□□□ 0.11
COL27A1-203ENST00000468565 CLTAP09496 248 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 ALADP13716 330 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 MTHFRP42898 656 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 CLCNKBP51801 687 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 SLC10A6Q3KNW5 377 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 RTP2Q5QGT7 225 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 FAM171A1Q5VUB5 890 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 PDXDC1Q6P996 788 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 ELMSAN1Q6PJG2 1045 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 KCNG4Q8TDN1 519 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 HDAC7Q8WUI4 952 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 RIN2Q8WYP3 895 aaPredicted RBP15.76■□□□□ 0.11
COL27A1-203ENST00000468565 PIK3R5Q8WYR1 880 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 RIPOR3Q96MK2 946 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 TTPALQ9BTX7 342 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 PLEKHA5Q9HAU0 1116 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.76■□□□□ 0.11
COL27A1-203ENST00000468565 ZNF500O60304 480 aaPredicted RBP15.75■□□□□ 0.11
COL27A1-203ENST00000468565 B3GAT3O94766 335 aa15.75■□□□□ 0.11
COL27A1-203ENST00000468565 GLUD1P00367 558 aa15.75■□□□□ 0.11
COL27A1-203ENST00000468565 SOX4Q06945 474 aaPredicted RBP15.75■□□□□ 0.11
COL27A1-203ENST00000468565 RARS2Q5T160 578 aaKnown RBP15.75■□□□□ 0.11
COL27A1-203ENST00000468565 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.75■□□□□ 0.11
COL27A1-203ENST00000468565 ZNF720Q7Z2F6 126 aa15.75■□□□□ 0.11
COL27A1-203ENST00000468565 SFR1Q86XK3 245 aa15.75■□□□□ 0.11
COL27A1-203ENST00000468565 CUEDC2Q9H467 287 aa15.75■□□□□ 0.11
COL27A1-203ENST00000468565 GOLGA2P5Q9HBQ8 144 aa15.75■□□□□ 0.11
COL27A1-203ENST00000468565 FRMD3A2A2Y4 597 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 FAM189A1O60320 539 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 PPP1R37O75864 691 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 CAVIN2O95810 425 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 FGFR3P22607 806 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 RPL9P32969 192 aaKnown RBP15.74■□□□□ 0.11
COL27A1-203ENST00000468565 ME1P48163 572 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 NUBP1P53384 320 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 E2F4Q16254 413 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 SEZ6Q53EL9 994 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 CD300LGQ6UXG3 332 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 RNF135Q8IUD6 432 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 C12orf76Q8N812 135 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-203ENST00000468565 CMASQ8NFW8 434 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-203ENST00000468565 LRRC27Q9C0I9 530 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 OLFML3Q9NRN5 406 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 MYO10Q9HD67 2058 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 A0A0B4J269 797 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 OGTO15294 1046 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 DCXO43602 365 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 TRAPPC3O43617 180 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 CXCL8P10145 99 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 ZC2HC1CQ53FD0 456 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-203ENST00000468565 ATAT1Q5SQI0 421 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 AXDND1Q5T1B0 1012 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-203ENST00000468565 SLC39A4Q6P5W5 647 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 SHC4Q6S5L8 630 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 C15orf39Q6ZRI6 1047 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 GPR149Q86SP6 731 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 PDILTQ8N807 584 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 C3orf58Q8NDZ4 430 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 LNX1Q8TBB1 728 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-203ENST00000468565 TSPAN18Q96SJ8 248 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 STRA6Q9BX79 667 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 RHOBTB2Q9BYZ6 727 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 MAN1C1Q9NR34 630 aa15.74■□□□□ 0.11
COL27A1-203ENST00000468565 TTC26A0AVF1 554 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 PODXLO00592 558 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 PAPLNO95428 1278 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 ADRB2P07550 413 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 PPP2R3AQ06190 1150 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 PSMD5Q16401 504 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 HERC4Q5GLZ8 1057 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-203ENST00000468565 SLFN12LQ6IEE8 588 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 PRSS55Q6UWB4 352 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-203ENST00000468565 CYP26C1Q6V0L0 522 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 RPGRIP1Q96KN7 1286 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 NAP1L5Q96NT1 182 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-203ENST00000468565 MSTO1Q9BUK6 570 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 PLEKHA4Q9H4M7 779 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 POMKQ9H5K3 350 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 MRPL44Q9H9J2 332 aaKnown RBP15.73■□□□□ 0.11
COL27A1-203ENST00000468565 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.73■□□□□ 0.11
COL27A1-203ENST00000468565 CDH22Q9UJ99 828 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 NR2E1Q9Y466 385 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 STYXL1Q9Y6J8 313 aa15.73■□□□□ 0.11
COL27A1-203ENST00000468565 KINO60870 393 aaKnown RBP15.72■□□□□ 0.11
COL27A1-203ENST00000468565 TNFSF9P41273 254 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 FAM160A1Q05DH4 1040 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 ALCAMQ13740 583 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 ANO6Q4KMQ2 910 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 LILRA6Q6PI73 481 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 TMC5Q6UXY8 1006 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 CEP57Q86XR8 500 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 IQUBQ8NA54 791 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 KBTBD4Q9NVX7 518 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 A0A1W2PQ27 194 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 A0A1W2PQ64 194 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 A0A1W2PQD8 194 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 TGM5O43548 720 aa15.72■□□□□ 0.11
COL27A1-203ENST00000468565 GPR37L1O60883 481 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms